RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MROH5Q6ZUA9 1318 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 DTNBO60941 627 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 IL6STP40189 918 aaPredicted RBP21.8■■□□□ 1.08
SHANK1-203ENST00000391813 BEND3Q5T5X7 828 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 ZNF365Q70YC5 407 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 VPS52Q8N1B4 723 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
SHANK1-203ENST00000391813 PICALMQ13492 652 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 PHLDB3Q6NSJ2 640 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 CCDC170Q8IYT3 715 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 MAGEB6Q8N7X4 407 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 RGS22Q8NE09 1264 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 LPIN2Q92539 896 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 ADAM21Q9UKJ8 722 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 KCNJ18B7U540 433 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 GPAA1O43292 621 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 KCNJ12Q14500 433 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 SFMBT2Q5VUG0 894 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 TBC1D22AQ8WUA7 517 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 RNF17Q9BXT8 1623 aaKnown RBP21.79■■□□□ 1.08
SHANK1-203ENST00000391813 FAM13AO94988 1023 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 EPHB4P54760 987 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 SLC35F6Q8N357 371 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 ZNF131P52739 623 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 RPS8P62241 208 aaKnown RBP21.79■■□□□ 1.08
SHANK1-203ENST00000391813 C11orf57Q6ZUT1 292 aaPredicted RBP21.79■■□□□ 1.08
SHANK1-203ENST00000391813 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 CNKSR1Q969H4 720 aa21.79■■□□□ 1.08
SHANK1-203ENST00000391813 UNC13BO14795 1591 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 TIMM10P62072 90 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 SEPT12Q8IYM1 358 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 SH2D4AQ9H788 454 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 ACTR5Q9H9F9 607 aaPredicted RBP21.78■■□□□ 1.08
SHANK1-203ENST00000391813 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.78■■□□□ 1.08
SHANK1-203ENST00000391813 GUCY2FP51841 1108 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 DCAF17Q5H9S7 520 aaPredicted RBP21.78■■□□□ 1.08
SHANK1-203ENST00000391813 RBM26Q5T8P6 1007 aaKnown RBP21.78■■□□□ 1.08
SHANK1-203ENST00000391813 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 RASEFQ8IZ41 740 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 MCM9Q9NXL9 1143 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 BICD1Q96G01 975 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 TACO1Q9BSH4 297 aaKnown RBP21.78■■□□□ 1.08
SHANK1-203ENST00000391813 USP44Q9H0E7 712 aa21.78■■□□□ 1.08
SHANK1-203ENST00000391813 MAP7Q14244 749 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 TYW1BQ6NUM6 668 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 PIK3AP1Q6ZUJ8 805 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 NOSTRINQ8IVI9 506 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 INF2Q27J81 1249 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 MBD4O95243 580 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 HHATQ5VTY9 493 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 PHKBQ93100 1093 aa21.77■■□□□ 1.08
SHANK1-203ENST00000391813 V9GY48 417 aaPredicted RBP21.77■■□□□ 1.08
SHANK1-203ENST00000391813 GLI2P10070 1586 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 CASP8Q14790 479 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 MUM1Q2TAK8 710 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 MAP7D1Q3KQU3 841 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 TADA2BQ86TJ2 420 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 POLR3EQ9NVU0 708 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 LRRD1A4D1F6 860 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 MORC3Q14149 939 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 DPCR1Q3MIW9 517 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 NIM1KQ8IY84 436 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 CLTAP09496 248 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 ZNF853P0CG23 659 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 IFT88Q13099 833 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 SAMM50Q9Y512 469 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 PCDHA5Q9Y5H7 936 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 CCDC169A6NNP5 214 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 STX2P32856 288 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 LETM2Q2VYF4 491 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 ANKRD20A3Q5VUR7 823 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 RRAGAQ7L523 313 aa21.76■■□□□ 1.07
SHANK1-203ENST00000391813 TRIM37O94972 964 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 RNF168Q8IYW5 571 aaPredicted RBP21.75■■□□□ 1.07
SHANK1-203ENST00000391813 IMPG2Q9BZV3 1241 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 GJA3Q9Y6H8 435 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 SYNCQ9H7C4 482 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 ASIC3Q9UHC3 531 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 RAD51AP2Q09MP3 1159 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 SLC39A14Q15043 492 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 STK38LQ9Y2H1 464 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 JCADQ9P266 1359 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 A0A0D9SFI3 127 aa21.75■■□□□ 1.07
SHANK1-203ENST00000391813 NDC80O14777 642 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 GJC1P36383 396 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 E2F4Q16254 413 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 RAB3IL1Q8TBN0 382 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 ZKSCAN3Q9BRR0 538 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 FRMD4BQ9Y2L6 1034 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 PEX19P40855 299 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 TEX11Q8IYF3 940 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 CCDC197Q8NCU1 140 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 TXNDC16Q9P2K2 825 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 USH1CQ9Y6N9 552 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 MAP3K15Q6ZN16 1313 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 CFAP157Q5JU67 520 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 STAG1Q8WVM7 1258 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 LARSQ9P2J5 1176 aaKnown RBP21.74■■□□□ 1.07
SHANK1-203ENST00000391813 NEURL1BA8MQ27 555 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 PPP6R2O75170 966 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms