RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 USP17L2Q6R6M4 530 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 AMOTL1Q8IY63 956 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 STAMQ92783 540 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 CDC25AP30304 524 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 MCM7P33993 719 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 EIF6P56537 245 aaKnown RBP19.62■□□□□ 0.73
PDX1-201ENST00000381033 MTERF4Q7Z6M4 381 aaKnown RBP19.62■□□□□ 0.73
PDX1-201ENST00000381033 NLGN1Q8N2Q7 840 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 DHX58Q96C10 678 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 ZC3H12CQ9C0D7 883 aaKnown RBP19.62■□□□□ 0.73
PDX1-201ENST00000381033 XPO4Q9C0E2 1151 aaKnown RBP19.62■□□□□ 0.73
PDX1-201ENST00000381033 IFNKQ9P0W0 207 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 SNED1Q8TER0 1413 aa19.62■□□□□ 0.73
PDX1-201ENST00000381033 DDX60LQ5H9U9 1706 aaKnown RBP19.61■□□□□ 0.73
PDX1-201ENST00000381033 VWA3AA6NCI4 1184 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 CEP95Q96GE4 821 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 DBNDD1Q9H9R9 158 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 LTBP1Q14766 1721 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 IL17AQ16552 155 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 TTC38Q5R3I4 469 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 C16orf86Q6ZW13 317 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.61■□□□□ 0.73
PDX1-201ENST00000381033 SYMPKQ92797 1274 aaKnown RBP19.61■□□□□ 0.73
PDX1-201ENST00000381033 MRFAP1L1Q96HT8 127 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 FAM13BQ9NYF5 915 aa19.61■□□□□ 0.73
PDX1-201ENST00000381033 TTF2Q9UNY4 1162 aaKnown RBP19.61■□□□□ 0.73
PDX1-201ENST00000381033 ACTN4O43707 911 aaKnown RBP19.6■□□□□ 0.73
PDX1-201ENST00000381033 SMC2O95347 1197 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 KIF5BP33176 963 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 AFMP43652 599 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 POSTNQ15063 836 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 VAT1LQ9HCJ6 419 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 GAKO14976 1311 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 GRM4Q14833 912 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 WWC2Q6AWC2 1192 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 DPP8Q6V1X1 898 aaPredicted RBP19.6■□□□□ 0.73
PDX1-201ENST00000381033 PRDM16Q9HAZ2 1276 aa19.6■□□□□ 0.73
PDX1-201ENST00000381033 HEATR3Q7Z4Q2 680 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 HOMER1Q86YM7 354 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 ANKS1AQ92625 1134 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 DPF2Q92785 391 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 FAM163AQ96GL9 167 aaPredicted RBP19.59■□□□□ 0.73
PDX1-201ENST00000381033 BRMS1Q9HCU9 246 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 MAN1B1Q9UKM7 699 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 ADAMTSL1Q8N6G6 1762 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 MYH1P12882 1939 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 CACNB3P54284 484 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 SPTLC3Q9NUV7 552 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 CEP131Q9UPN4 1083 aa19.59■□□□□ 0.73
PDX1-201ENST00000381033 PLSCR1O15162 318 aa19.58■□□□□ 0.73
PDX1-201ENST00000381033 LRRC8AQ8IWT6 810 aa19.58■□□□□ 0.73
PDX1-201ENST00000381033 TRMT44Q8IYL2 757 aaKnown RBP19.58■□□□□ 0.73
PDX1-201ENST00000381033 TBC1D22AQ8WUA7 517 aa19.58■□□□□ 0.73
PDX1-201ENST00000381033 BPIFA3Q9BQP9 254 aa19.58■□□□□ 0.73
PDX1-201ENST00000381033 UBA5Q9GZZ9 404 aa19.58■□□□□ 0.73
PDX1-201ENST00000381033 KLRF2D3W0D1 207 aa19.58■□□□□ 0.72
PDX1-201ENST00000381033 NPR1P16066 1061 aa19.58■□□□□ 0.72
PDX1-201ENST00000381033 ZNF579Q8NAF0 562 aaKnown RBP19.58■□□□□ 0.72
PDX1-201ENST00000381033 COA1Q9GZY4 146 aa19.58■□□□□ 0.72
PDX1-201ENST00000381033 FANCLQ9NW38 375 aa19.58■□□□□ 0.72
PDX1-201ENST00000381033 PALM3A6NDB9 673 aaPredicted RBP19.57■□□□□ 0.72
PDX1-201ENST00000381033 CDC25BP30305 580 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 CHRNA5P30532 468 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 FMR1Q06787 632 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDX1-201ENST00000381033 ZFPM1Q8IX07 1006 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 BLIDQ8IZY5 108 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 MED15Q96RN5 788 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 TCP11L1Q9NUJ3 509 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 PARP3Q9Y6F1 533 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 LRRC37AA6NMS7 1700 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 NFIAQ12857 509 aa19.57■□□□□ 0.72
PDX1-201ENST00000381033 EGFL6Q8IUX8 553 aa19.56■□□□□ 0.72
PDX1-201ENST00000381033 NEDD1Q8NHV4 660 aa19.56■□□□□ 0.72
PDX1-201ENST00000381033 COL11A2P13942 1736 aaPredicted RBP19.56■□□□□ 0.72
PDX1-201ENST00000381033 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
PDX1-201ENST00000381033 USP17L5A8MUK1 530 aa19.56■□□□□ 0.72
PDX1-201ENST00000381033 AKR1B1P15121 316 aa19.56■□□□□ 0.72
PDX1-201ENST00000381033 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
PDX1-201ENST00000381033 SMYD4Q8IYR2 804 aaPredicted RBP19.56■□□□□ 0.72
PDX1-201ENST00000381033 LRRC47Q8N1G4 583 aaKnown RBP19.56■□□□□ 0.72
PDX1-201ENST00000381033 TSC1Q92574 1164 aa19.56■□□□□ 0.72
PDX1-201ENST00000381033 FAM196BA6NMK8 535 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 USP27XA6NNY8 438 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 COBLO75128 1261 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 TPM3P06753 285 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 ATP2C1P98194 919 aaPredicted RBP19.55■□□□□ 0.72
PDX1-201ENST00000381033 FANCCQ00597 558 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 USP40Q9NVE5 1235 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 G3V3G9 751 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 PLCG2P16885 1265 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 SARSP49591 514 aaKnown RBP19.55■□□□□ 0.72
PDX1-201ENST00000381033 INF2Q27J81 1249 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 TMC6Q7Z403 805 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 KIAA0825Q8IV33 1275 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 PDGFDQ9GZP0 370 aaPredicted RBP19.55■□□□□ 0.72
PDX1-201ENST00000381033 PCDHA4Q9UN74 947 aa19.55■□□□□ 0.72
PDX1-201ENST00000381033 UQCRHLA0A096LP55 91 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 STXBP3O00186 592 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 UQCRHP07919 91 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms