RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 IQUBQ8NA54 791 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 IL17RBQ9NRM6 502 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 MKRN1Q9UHC7 482 aaKnown RBP12.4□□□□□ -0.42
BEST1-201ENST00000378043 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 MAST2Q6P0Q8 1798 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 CDC25AP30304 524 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 FXR1P51114 621 aaKnown RBP eCLIP12.39□□□□□ -0.43
BEST1-201ENST00000378043 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 ARPP21Q9UBL0 812 aaPredicted RBP12.39□□□□□ -0.43
BEST1-201ENST00000378043 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
BEST1-201ENST00000378043 LRRC10BA6NIK2 292 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 TSPY2A6NKD2 308 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 MFAP3LO75121 409 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
BEST1-201ENST00000378043 CASP14P31944 242 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 TERF2Q15554 542 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 SLC35G1Q2M3R5 365 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 STAG2Q8N3U4 1231 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 RNF225M0QZC1 329 aaPredicted RBP12.39□□□□□ -0.43
BEST1-201ENST00000378043 KIF20AO95235 890 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 CCDC175P0C221 793 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 TM4SF1P30408 202 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 BMS1Q14692 1282 aaKnown RBP12.39□□□□□ -0.43
BEST1-201ENST00000378043 KRT31Q15323 416 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
BEST1-201ENST00000378043 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.43
BEST1-201ENST00000378043 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 CTAGE1Q96RT6 745 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
BEST1-201ENST00000378043 M0R2N6 131 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 FECHP22830 423 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
BEST1-201ENST00000378043 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 LZTFL1Q9NQ48 299 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 GTPBP6O43824 516 aaPredicted RBP12.38□□□□□ -0.43
BEST1-201ENST00000378043 PLA2G4AP47712 749 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 TFAP4Q01664 338 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 PPP2R3AQ06190 1150 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
BEST1-201ENST00000378043 NAA15Q9BXJ9 866 aaKnown RBP12.38□□□□□ -0.43
BEST1-201ENST00000378043 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
BEST1-201ENST00000378043 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 ITIH6Q6UXX5 1313 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 ARL6IP4Q66PJ3 421 aaKnown RBP12.37□□□□□ -0.43
BEST1-201ENST00000378043 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 DYNLL2Q96FJ2 89 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 RWDD2AQ9UIY3 292 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
BEST1-201ENST00000378043 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
BEST1-201ENST00000378043 RGL2O15211 777 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 SEC31AO94979 1220 aaKnown RBP12.37□□□□□ -0.43
BEST1-201ENST00000378043 ABL1P00519 1130 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 KIF5BP33176 963 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 NAALADL2Q58DX5 795 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 ZNF658Q5TYW1 1059 aaPredicted RBP12.37□□□□□ -0.43
BEST1-201ENST00000378043 NBPF5PQ86XG9 351 aaPredicted RBP12.37□□□□□ -0.43
BEST1-201ENST00000378043 PNMA1Q8ND90 353 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 MAPK8IP1Q9UQF2 711 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 GDAQ9Y2T3 454 aa12.37□□□□□ -0.43
BEST1-201ENST00000378043 CYTH3O43739 400 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 PRCPP42785 496 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 GRIK5Q16478 980 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 FILIP1LQ4L180 1135 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 DGKHQ86XP1 1220 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 IRF2BP1Q8IU81 584 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 CCDC12Q8WUD4 166 aaPredicted RBP12.36□□□□□ -0.43
BEST1-201ENST00000378043 ANKS1AQ92625 1134 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 NYXQ9GZU5 481 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 MAD2L2Q9UI95 211 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 PCDHA4Q9UN74 947 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 N4BP3O15049 544 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
BEST1-201ENST00000378043 CALML3P27482 149 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
BEST1-201ENST00000378043 ERVK-24P63145 666 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 PAK1Q13153 545 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 TMCO3Q6UWJ1 677 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 NELFBQ8WX92 580 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 VPS16Q9H269 839 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
BEST1-201ENST00000378043 TNRC6CQ9HCJ0 1690 aaKnown RBP12.36□□□□□ -0.43
BEST1-201ENST00000378043 MYH1P12882 1939 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 PP2D1A8MPX8 630 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms