RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TMCO3Q6UWJ1 677 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 CELF1Q92879 486 aaKnown RBP12.1□□□□□ -0.47
ABCF1-202ENST00000376545 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-202ENST00000376545 ACSBG1Q96GR2 724 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 DESI2Q9BSY9 194 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-202ENST00000376545 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
ABCF1-202ENST00000376545 MYH1P12882 1939 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 CTCFLQ8NI51 663 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 NMT2O60551 498 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 STX17P56962 302 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 TUBB2AQ13885 445 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 ZNF658Q5TYW1 1059 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 CC2D1AQ6P1N0 951 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 BARGINQ6ZT62 677 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 TUBB2BQ9BVA1 445 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 SEMA3FQ13275 785 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 KRT31Q15323 416 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 FILIP1LQ4L180 1135 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 CRNKL1Q9BZJ0 848 aaKnown RBP12.09□□□□□ -0.47
ABCF1-202ENST00000376545 ST7Q9NRC1 585 aa12.09□□□□□ -0.47
ABCF1-202ENST00000376545 KLRK1P26718 216 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 CASP14P31944 242 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 FAM177A1Q8N128 213 aaPredicted RBP12.08□□□□□ -0.48
ABCF1-202ENST00000376545 LINC00116Q8NCU8 138 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 KLHL10Q6JEL2 608 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 PIK3AP1Q6ZUJ8 805 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 CTNND2Q9UQB3 1225 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.48
ABCF1-202ENST00000376545 CALML3P27482 149 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 SPAG1Q07617 926 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 TRIM14Q14142 442 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 TCP11X2Q5H9J9 407 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 DAGLBQ8NCG7 672 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 IRX2Q9BZI1 471 aaPredicted RBP12.07□□□□□ -0.48
ABCF1-202ENST00000376545 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 DDX60LQ5H9U9 1706 aaKnown RBP12.07□□□□□ -0.48
ABCF1-202ENST00000376545 NAV1Q8NEY1 1877 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 A0A0U1RQJ8 604 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 SASH3O75995 380 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 TXLNAP40222 546 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 NLRP5P59047 1200 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 ERVK-24P63145 666 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 PAK1Q13153 545 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
ABCF1-202ENST00000376545 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
ABCF1-202ENST00000376545 SRGAP1Q7Z6B7 1085 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 TMTC1Q8IUR5 882 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 GOLGA1Q92805 767 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 PARD6BQ9BYG5 372 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 IL17RBQ9NRM6 502 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 ABHD10Q9NUJ1 306 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
ABCF1-202ENST00000376545 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
ABCF1-202ENST00000376545 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 JAKMIP3Q5VZ66 844 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 IRF2BP1Q8IU81 584 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 BLIDQ8IZY5 108 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 BLZF1Q9H2G9 400 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 FAM205AQ6ZU69 1335 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 RNF225M0QZC1 329 aaPredicted RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 RPN1P04843 607 aaKnown RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 CYP2D6P10635 497 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 KIF5BP33176 963 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 TUBB4BP68371 445 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 KCNB1Q14721 858 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 RRAGBQ5VZM2 374 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 MYO1AQ9UBC5 1043 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 CDC23Q9UJX2 597 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 SEC31AO94979 1220 aaKnown RBP12.06□□□□□ -0.48
ABCF1-202ENST00000376545 MYL1P05976 194 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 PRDX5P30044 214 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 MCM7P33993 719 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 ADSSL1Q8N142 457 aa12.06□□□□□ -0.48
ABCF1-202ENST00000376545 STAMQ92783 540 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms