RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 KLRF2D3W0D1 207 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 DYNC1I1O14576 645 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 SFPQP23246 707 aaKnown RBP eCLIP18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 INF2Q27J81 1249 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 CERS5Q8N5B7 392 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 FERMT2Q96AC1 680 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 INTS13Q9NVM9 706 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
CNKSR1-202ENST00000374253 CD44P16070 742 aaKnown RBP18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 CDK11BP21127 795 aaKnown RBP18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 C16orf86Q6ZW13 317 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 UBA5Q9GZZ9 404 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 CDK5RAP2Q96SN8 1893 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 PP2D1A8MPX8 630 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 NEMFO60524 1076 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 SLFN14P0C7P3 912 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 GSDMDP57764 484 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 NT5DC1Q5TFE4 455 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 CRAMP1Q96RY5 1269 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 PLIN2Q99541 437 aa18.19■□□□□ 0.5
CNKSR1-202ENST00000374253 KCNQ5Q9NR82 932 aa18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 IMPACTQ9P2X3 320 aa18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 FRMPD2Q68DX3 1309 aaPredicted RBP18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 TMED8Q6PL24 325 aaPredicted RBP18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 ANKS1AQ92625 1134 aa18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 DDX4Q9NQI0 724 aaKnown RBP18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 PCDHA8Q9Y5H6 950 aa18.18■□□□□ 0.5
CNKSR1-202ENST00000374253 PALM3A6NDB9 673 aaPredicted RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 ZC3H12CQ9C0D7 883 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 TMEM60Q9H2L4 133 aa18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 DDX60LQ5H9U9 1706 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 STXBP3O00186 592 aa18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 CALML3P27482 149 aa18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 KARSQ15046 597 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 CCAR2Q8N163 923 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 MLKLQ8NB16 471 aa18.17■□□□□ 0.5
CNKSR1-202ENST00000374253 BMP15O95972 392 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 CEP135Q66GS9 1140 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 E4F1Q66K89 784 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 SP8Q8IXZ3 490 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 ELOA2Q8IYF1 753 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 SPATA20Q8TB22 786 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 MTRQ99707 1265 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 APBA3O96018 575 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 MMP10P09238 476 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 SRGNP10124 158 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 NAPAP54920 295 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 DPYDQ12882 1025 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 CUL4BQ13620 913 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 NEDD1Q8NHV4 660 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 TBC1D22AQ8WUA7 517 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 GAKO14976 1311 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 UTRNP46939 3433 aa18.16■□□□□ 0.5
CNKSR1-202ENST00000374253 MYH1P12882 1939 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 TOP1P11387 765 aaKnown RBP18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 PLCG2P16885 1265 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 GNAQP50148 359 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 PTPN14Q15678 1187 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 SH3RF1Q7Z6J0 888 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 VSTM4Q8IW00 320 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 C4orf32Q8N8J7 132 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 CCDC150Q8NCX0 1101 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 PIGSQ96S52 555 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 DBNDD1Q9H9R9 158 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 BARHL2Q9NY43 387 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 MAPK8IP1Q9UQF2 711 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 KLRG2A4D1S0 409 aaPredicted RBP18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 AKR1B1P15121 316 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 CACNB3P54284 484 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 ZNF710Q8N1W2 664 aa18.15■□□□□ 0.5
CNKSR1-202ENST00000374253 G3V3G9 751 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 CBFA2T2O43439 604 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 NAA30Q147X3 362 aaPredicted RBP18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 E2F4Q16254 413 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 DCAF8Q5TAQ9 597 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 RASSF8Q8NHQ8 419 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 M0R2N6 131 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 ZBTB22O15209 634 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 ZNF18P17022 549 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 TRAPPC10P48553 1259 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 SLF2Q8IX21 1173 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms