RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RASGRP2Q7LDG7 609 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 LUZP1Q86V48 1076 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 KCNH3Q9ULD8 1083 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 USP17L5A8MUK1 530 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 ADCY5O95622 1261 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 TTC38Q5R3I4 469 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 RSBN1LQ6PCB5 846 aaPredicted RBP28.61■■■□□ 2.17
CTSA-203ENST00000372459 PIK3AP1Q6ZUJ8 805 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 HEATR3Q7Z4Q2 680 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 ZSCAN29Q8IWY8 852 aaPredicted RBP28.61■■■□□ 2.17
CTSA-203ENST00000372459 ZNF277Q9NRM2 450 aaPredicted RBP28.61■■■□□ 2.17
CTSA-203ENST00000372459 CLIP2Q9UDT6 1046 aa28.61■■■□□ 2.17
CTSA-203ENST00000372459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.6■■■□□ 2.17
CTSA-203ENST00000372459 DDTLA6NHG4 134 aaPredicted RBP28.6■■■□□ 2.17
CTSA-203ENST00000372459 TGFB2P61812 414 aa28.6■■■□□ 2.17
CTSA-203ENST00000372459 ASPRV1Q53RT3 343 aa28.6■■■□□ 2.17
CTSA-203ENST00000372459 RRP36Q96EU6 259 aaKnown RBP28.6■■■□□ 2.17
CTSA-203ENST00000372459 STXBP3O00186 592 aa28.59■■■□□ 2.17
CTSA-203ENST00000372459 MPHOSPH10O00566 681 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 MSNP26038 577 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 ZRSR1Q15695 479 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 LRRC47Q8N1G4 583 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 DAGLBQ8NCG7 672 aa28.59■■■□□ 2.17
CTSA-203ENST00000372459 TRIM34Q9BYJ4 488 aa28.59■■■□□ 2.17
CTSA-203ENST00000372459 TDRD3Q9H7E2 651 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 GREB1LQ9C091 1923 aaPredicted RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 EIF6P56537 245 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 NOM1Q5C9Z4 860 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 CCDC12Q8WUD4 166 aaPredicted RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 ERCC4Q92889 916 aaPredicted RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 DNAJC18Q9H819 358 aa28.59■■■□□ 2.17
CTSA-203ENST00000372459 SEC63Q9UGP8 760 aaKnown RBP28.59■■■□□ 2.17
CTSA-203ENST00000372459 SIPA1L1O43166 1804 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 ENTPD3O75355 529 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 VIL1P09327 827 aaKnown RBP28.58■■■□□ 2.17
CTSA-203ENST00000372459 SNHG28P0DPA3 235 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 PLCB2Q00722 1185 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 GRIN1Q05586 938 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 TYW1BQ6NUM6 668 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 FOXP4Q8IVH2 680 aaPredicted RBP28.58■■■□□ 2.17
CTSA-203ENST00000372459 PIM2Q9P1W9 311 aa28.58■■■□□ 2.17
CTSA-203ENST00000372459 ZBTB7AO95365 584 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 SH3BP5LQ7L8J4 393 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 FERMT2Q96AC1 680 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 CPVLQ9H3G5 476 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 POLD1P28340 1107 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 ZNF174Q15697 407 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 SPECC1Q5M775 1068 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 C11orf57Q6ZUT1 292 aaPredicted RBP28.57■■■□□ 2.16
CTSA-203ENST00000372459 PRMT6Q96LA8 375 aaPredicted RBP28.57■■■□□ 2.16
CTSA-203ENST00000372459 CCDC39Q9UFE4 941 aa28.57■■■□□ 2.16
CTSA-203ENST00000372459 PSMD14O00487 310 aa28.56■■■□□ 2.16
CTSA-203ENST00000372459 RAD17O75943 681 aa28.56■■■□□ 2.16
CTSA-203ENST00000372459 CLEC10AQ8IUN9 316 aa28.56■■■□□ 2.16
CTSA-203ENST00000372459 RIOX1Q9H6W3 641 aa28.56■■■□□ 2.16
CTSA-203ENST00000372459 HDAC9Q9UKV0 1011 aa28.56■■■□□ 2.16
CTSA-203ENST00000372459 M0R2N6 131 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 CERKLQ49MI3 558 aaPredicted RBP28.55■■■□□ 2.16
CTSA-203ENST00000372459 KRBA2Q6ZNG9 492 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 HOMER1Q86YM7 354 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 CEP57L1Q8IYX8 460 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 NAT10Q9H0A0 1025 aaKnown RBP28.55■■■□□ 2.16
CTSA-203ENST00000372459 CSRNP2Q9H175 543 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 FRMPD2Q68DX3 1309 aaPredicted RBP28.55■■■□□ 2.16
CTSA-203ENST00000372459 ATRNL1Q5VV63 1379 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 WNT7AO00755 349 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 ADAMTS3O15072 1205 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 ELOA2Q8IYF1 753 aaPredicted RBP28.55■■■□□ 2.16
CTSA-203ENST00000372459 CNNM3Q8NE01 707 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 UBA5Q9GZZ9 404 aa28.55■■■□□ 2.16
CTSA-203ENST00000372459 COL2A1P02458 1487 aaPredicted RBP28.54■■■□□ 2.16
CTSA-203ENST00000372459 ATP2C1P98194 919 aaPredicted RBP28.54■■■□□ 2.16
CTSA-203ENST00000372459 LONRF3Q496Y0 759 aa28.54■■■□□ 2.16
CTSA-203ENST00000372459 VAT1LQ9HCJ6 419 aa28.54■■■□□ 2.16
CTSA-203ENST00000372459 TMOD2Q9NZR1 351 aa28.54■■■□□ 2.16
CTSA-203ENST00000372459 CCDC194A0A1B0GVG4 234 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 hCG_1984214I3L0E3 225 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 SLURP2P0DP57 97 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 NAPAP54920 295 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 IQCB1Q15051 598 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 TATDN1Q6P1N9 297 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 NIM1KQ8IY84 436 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 ZNF713Q8N859 430 aaPredicted RBP28.53■■■□□ 2.16
CTSA-203ENST00000372459 PIGSQ96S52 555 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 GMLQ99445 158 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 MTFR1LQ9H019 292 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 ZMYND12Q9H0C1 365 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 PCDHA6Q9UN73 950 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 PCDHA8Q9Y5H6 950 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 COL4A5P29400 1685 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 AP5Z1O43299 807 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 PTMAP06454 111 aaKnown RBP28.53■■■□□ 2.16
CTSA-203ENST00000372459 METTL16Q86W50 562 aaKnown RBP28.53■■■□□ 2.16
CTSA-203ENST00000372459 OGFOD1Q8N543 542 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 HOOK1Q9UJC3 728 aaKnown RBP28.53■■■□□ 2.16
CTSA-203ENST00000372459 ZNRF3Q9ULT6 936 aa28.53■■■□□ 2.16
CTSA-203ENST00000372459 ATF5Q9Y2D1 282 aaPredicted RBP28.53■■■□□ 2.16
CTSA-203ENST00000372459 SPDYE2BA6NHP3 402 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 FAM196BA6NMK8 535 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 GOLGA6L19H0YKK7 550 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms