RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FAM208AQ9UK61 1670 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 CARMIL3Q8ND23 1372 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 FAM196BA6NMK8 535 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 MAP2K1Q02750 393 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 NKX1-1Q15270 411 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 KIAA0753Q2KHM9 967 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 KLHL7Q8IXQ5 586 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 SLC44A5Q8NCS7 719 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 USP40Q9NVE5 1235 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 USP21Q9UK80 565 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 EEF2P13639 858 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 SNAP25P60880 206 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 IRX5P78411 483 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 FAM196AQ6ZSG2 479 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 RRAGAQ7L523 313 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 C2CD5Q86YS7 1000 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 GTPBP4Q9BZE4 634 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 MROH5Q6ZUA9 1318 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 KRBA2Q6ZNG9 492 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 CABP7Q86V35 215 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 CNGA4Q8IV77 575 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
SMARCA1-202ENST00000371122 CCDC169A6NNP5 214 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 PRDX5P30044 214 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 SPECC1LQ69YQ0 1117 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 LINC00301Q8NCQ3 95 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 PSMD1Q99460 953 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 COL14A1Q05707 1796 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 CYP2E1P05181 493 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 MRPL12P52815 198 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 ARHGAP44Q17R89 818 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 EPC1Q9H2F5 836 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 BUB1O43683 1085 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 SEC31AO94979 1220 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 PLEKHA8P1O95397 391 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 KIF23Q02241 960 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 STOX1Q6ZVD7 989 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 HS2ST1Q7LGA3 356 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 TBC1D10CQ8IV04 446 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 REXO1Q8N1G1 1221 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 COA7Q96BR5 231 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 ERO1AQ96HE7 468 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 RBM28Q9NW13 759 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 BAZ2BQ9UIF8 2168 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 FOXN1O15353 648 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 CMA1P23946 247 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 ADD2P35612 726 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 MAGEA1P43355 309 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 NAA15Q9BXJ9 866 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 DBNDD1Q9H9R9 158 aa10.18□□□□□ -0.78
SMARCA1-202ENST00000371122 KIF24Q5T7B8 1368 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 PNPLA6Q8IY17 1366 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 CLRN2A0PK11 232 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 KRT83P78385 493 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 RESTQ13127 1097 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 CALCRLQ16602 461 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 TPH2Q8IWU9 490 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 UHMK1Q8TAS1 419 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 FBXO41Q8TF61 875 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 TCP10L2B9ZVM9 353 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 TRIM37O94972 964 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 ABCB4P21439 1286 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 CASP14P31944 242 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 BTDP43251 543 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 ATL3Q6DD88 541 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 KCTD1Q719H9 257 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 BLIDQ8IZY5 108 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 WDR66Q8TBY9 1149 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 THRAP3Q9Y2W1 955 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 ARHGAP6O43182 974 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 HSF2BPO75031 334 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 PLCG2P16885 1265 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 SLC39A14Q15043 492 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 PRR16Q569H4 304 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 CYB5R4Q7L1T6 521 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 PYM1Q9BRP8 204 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-202ENST00000371122 PDE4DIPQ5VU43 2346 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 ZMYM6O95789 1325 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 SPATA31A3Q5VYP0 1347 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 UBE2Q2LH0YL09 131 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 ZNF500O60304 480 aaPredicted RBP10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 JAKMIP2Q96AA8 810 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 ZNF408Q9H9D4 720 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 CALCOCO1Q9P1Z2 691 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 APBA3O96018 575 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 POTEJP0CG39 1038 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 SCG2P13521 617 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 GRIPAP1Q4V328 841 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 NAA35Q5VZE5 725 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 TTC19Q6DKK2 380 aaPredicted RBP10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 PPP4R3AQ6IN85 833 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
SMARCA1-202ENST00000371122 LARGE2Q8N3Y3 721 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms