RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
BRCC3-204ENST00000369462 WDR18Q9BV38 432 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 VCPKMTQ9H867 229 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 GOPCQ9HD26 462 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 GPCPD1Q9NPB8 672 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 IFNAR1P17181 557 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 MTMR2Q13614 643 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 KIAA1755Q5JYT7 1200 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 LDLRAD1Q5T700 205 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 SRBD1Q8N5C6 995 aaKnown RBP12.73□□□□□ -0.37
BRCC3-204ENST00000369462 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 CPVLQ9H3G5 476 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
BRCC3-204ENST00000369462 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 GNAQP50148 359 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 KIAA1683Q9H0B3 1180 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 BACE1P56817 501 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 FKBP1BP68106 108 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 DGKZQ13574 1117 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
BRCC3-204ENST00000369462 ZNF784Q8NCA9 323 aaPredicted RBP12.72□□□□□ -0.37
BRCC3-204ENST00000369462 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
BRCC3-204ENST00000369462 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
BRCC3-204ENST00000369462 AFG3L2Q9Y4W6 797 aa12.72□□□□□ -0.37
BRCC3-204ENST00000369462 FDPSP14324 419 aaKnown RBP12.71□□□□□ -0.37
BRCC3-204ENST00000369462 HMGN5P82970 282 aaKnown RBP12.71□□□□□ -0.37
BRCC3-204ENST00000369462 FUT2Q10981 343 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 ERO1BQ86YB8 467 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 SMC1BQ8NDV3 1235 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 SLC10A4Q96EP9 437 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 GMCL1Q96IK5 515 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 TOMM70O94826 608 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 BMP3P12645 472 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 HMGCS2P54868 508 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 SSRP1Q08945 709 aaKnown RBP12.71□□□□□ -0.37
BRCC3-204ENST00000369462 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 FAM184AQ8NB25 1140 aa12.71□□□□□ -0.37
BRCC3-204ENST00000369462 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.37
BRCC3-204ENST00000369462 CYTH3O43739 400 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 SLC16A2P36021 539 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 PPATQ06203 517 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-204ENST00000369462 LZTS2Q9BRK4 669 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 OTOFQ9HC10 1997 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 IRF6O14896 467 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-204ENST00000369462 USP14P54578 494 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
BRCC3-204ENST00000369462 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-204ENST00000369462 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 OPTNQ96CV9 577 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 LPAR1Q92633 364 aa12.7□□□□□ -0.38
BRCC3-204ENST00000369462 RNF26Q9BY78 433 aaPredicted RBP12.7□□□□□ -0.38
BRCC3-204ENST00000369462 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 UNCXA6NJT0 531 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
BRCC3-204ENST00000369462 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
BRCC3-204ENST00000369462 AIFM3Q96NN9 605 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 PASKQ96RG2 1323 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 PAPPA2Q9BXP8 1791 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 DDIT3P35638 169 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 FOSBP53539 338 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 HUNKP57058 714 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
BRCC3-204ENST00000369462 PRPF3O43395 683 aaKnown RBP12.68□□□□□ -0.38
BRCC3-204ENST00000369462 VCAM1P19320 739 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 SYT1P21579 422 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
BRCC3-204ENST00000369462 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 ADGRF4Q8IZF3 695 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 STK36Q9NRP7 1315 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 WDR46O15213 610 aaKnown RBP12.68□□□□□ -0.38
BRCC3-204ENST00000369462 DEXIO95424 95 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 STAT2P52630 851 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 PPIL2Q13356 520 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 PKP1Q13835 747 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 FBXO28Q9NVF7 368 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
BRCC3-204ENST00000369462 PDCP20941 246 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms