RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PPP1R12CQ9BZL4 782 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 GNA11P29992 359 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 VSIG1Q86XK7 387 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 KCNK3O14649 394 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 CXCR5P32302 372 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 TSGA10IPQ3SY00 556 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 M0R2C6 588 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 NR5A1Q13285 461 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 CCDC170Q8IYT3 715 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 STK38LQ9Y2H1 464 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 B4DLN1 442 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 MPHOSPH10O00566 681 aaKnown RBP17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 TOM1O60784 492 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 SRGAP2O75044 1071 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 NR1D1P20393 614 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 SLC7A5Q01650 507 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 PEX26Q7Z412 305 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 CROCCP2Q86T23 111 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 PPFIBP2Q8ND30 876 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 OSBP2Q969R2 916 aa17.71■□□□□ 0.43
CLSTN1-201ENST00000361311 ITGA6P23229 1130 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 CYP27A1Q02318 531 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 RBM43Q6ZSC3 357 aaKnown RBP17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 GSPT2Q8IYD1 628 aaKnown RBP17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 KRT12Q99456 494 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 STIM2Q9P246 746 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 CCDC63Q8NA47 563 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 TEX33O43247 280 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 KRT31Q15323 416 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 DCAF17Q5H9S7 520 aaPredicted RBP17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 EMBQ6PCB8 327 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 TET3O43151 1660 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 MRPS25P82663 173 aaKnown RBP17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 TAOK1Q7L7X3 1001 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 SYCP3Q8IZU3 236 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 COG1Q8WTW3 980 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 NUCKS1Q9H1E3 243 aaKnown RBP17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 MTUS1Q9ULD2 1270 aa17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLSTN1-201ENST00000361311 RGS16O15492 202 aaPredicted RBP17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 GBP1P32455 592 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 PTPN12Q05209 780 aaKnown RBP17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 TCP11Q8WWU5 503 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 DDX12PQ92771 950 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 FUT8Q9BYC5 575 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 EEF1GP26641 437 aaKnown RBP17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 AP1ARQ63HQ0 302 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 DYMQ7RTS9 669 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 ATP5DP30049 168 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 USP14P54578 494 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 TSNAXIP1Q2TAA8 658 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 ACTR5Q9H9F9 607 aaPredicted RBP17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 PLCB1Q9NQ66 1216 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
CLSTN1-201ENST00000361311 TNNI2P48788 182 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 DENND2CQ68D51 928 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 ZNF652Q9Y2D9 606 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 PCDHB6Q9Y5E3 794 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 SRPRBQ9Y5M8 271 aaKnown RBP17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 BAG3O95817 575 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 CABP7Q86V35 215 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 IFNL3Q8IZI9 196 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 MMP1P03956 469 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 EHHADHQ08426 723 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 ABHD10Q9NUJ1 306 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 MCM9Q9NXL9 1143 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 LRWD1Q9UFC0 647 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 A1BGP04217 495 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 ERMNQ8TAM6 284 aa17.68■□□□□ 0.42
CLSTN1-201ENST00000361311 KRIT1O00522 736 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 PDE6AP16499 860 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 RASSF7Q02833 373 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.67■□□□□ 0.422e-6■■■■■ 108.7
CLSTN1-201ENST00000361311 SPATS2LQ9NUQ6 558 aaKnown RBP17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 FBXO3Q9UK99 471 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 MED23Q9ULK4 1368 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 CTNNA2P26232 953 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 TXKP42681 527 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 CCDC197Q8NCU1 140 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 MRPL44Q9H9J2 332 aaKnown RBP17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 PRAMEF22A3QJZ6 481 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 PTPREP23469 700 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 PTPROQ16827 1216 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 HIBCHQ6NVY1 386 aaPredicted RBP17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 ENGASEQ8NFI3 743 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 EPSTI1Q96J88 318 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 DPH5Q9H2P9 285 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 CETN3O15182 167 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 HIP1RO75146 1068 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms