RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 FRMPD2Q68DX3 1309 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 OSBPP22059 807 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 PABPC4Q13310 644 aaKnown RBP eCLIP20.96■□□□□ 0.952e-6■■■□□ 14.6
PDLIM7-202ENST00000355841 TMEM87BQ96K49 555 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 PARK7Q99497 189 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 ZSWIM6Q9HCJ5 1215 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 ZCCHC17Q9NP64 241 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 FLOT1O75955 427 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 HSPA1AP0DMV8 641 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 HSPA1BP0DMV9 641 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 PDHBP11177 359 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 BMP3P12645 472 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 ANAPC15P60006 121 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 CCDC96Q2M329 555 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 NFXL1Q6ZNB6 911 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 RUFY3Q7L099 469 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 SMCR8Q8TEV9 937 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 GMCL1Q96IK5 515 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 MYL10Q9BUA6 226 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 ZFYVE28Q9HCC9 887 aa20.95■□□□□ 0.94
PDLIM7-202ENST00000355841 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 POTEEQ6S8J3 1075 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 Q6ZUG5 572 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 RAB11FIP4Q86YS3 637 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 GPCPD1Q9NPB8 672 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 CPA4Q9UI42 421 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 PNMA3Q9UL41 463 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 CYP46A1Q9Y6A2 500 aa20.94■□□□□ 0.94
PDLIM7-202ENST00000355841 WDR19Q8NEZ3 1342 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 TMEM232C9JQI7 657 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 FOXN1O15353 648 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 HERVK_113P62684 666 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 FGD1P98174 961 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 TTBK2Q6IQ55 1244 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 TM6SF1Q9BZW5 370 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 SAGE1Q9NXZ1 904 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 TLR2O60603 784 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 ECM2O94769 699 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 COG2Q14746 738 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 DCAF4Q8WV16 495 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 MTA3Q9BTC8 594 aa20.93■□□□□ 0.94
PDLIM7-202ENST00000355841 CCDC69A6NI79 296 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 SPDYE16A6NNV3 312 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 RXRAP19793 462 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 SLC16A2P36021 539 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 LIFRP42702 1097 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 IKQ13123 557 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 NUP133Q8WUM0 1156 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 KIF2CQ99661 725 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 CPVLQ9H3G5 476 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 BRPF3Q9ULD4 1205 aa20.92■□□□□ 0.94
PDLIM7-202ENST00000355841 ADGRA2Q96PE1 1338 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 SNHG28P0DPA3 235 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 RBM25P49756 843 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 ZNF654Q8IZM8 581 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 BRF1Q92994 677 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 KIFC2Q96AC6 838 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 ATG4CQ96DT6 458 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 IL17RAQ96F46 866 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 TXNRD2Q9NNW7 524 aa20.91■□□□□ 0.94
PDLIM7-202ENST00000355841 DSG3P32926 999 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 APOBRQ0VD83 1088 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 TROAPQ12815 778 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 TMTC2Q8N394 836 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 SLF1Q9BQI6 1058 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 PAGR1Q9BTK6 254 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 PDRG1Q9NUG6 133 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 PPP1R9AQ9ULJ8 1098 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 SLC12A7Q9Y666 1083 aa20.9■□□□□ 0.94
PDLIM7-202ENST00000355841 C17orf99Q6UX52 265 aa20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 SGMS1Q86VZ5 419 aa20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 CFHR5Q9BXR6 569 aa20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 HOXC10Q9NYD6 342 aa20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 RBPJLQ9UBG7 517 aa20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 FEM1BQ9UK73 627 aa20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 NAP1L2Q9ULW6 460 aaPredicted RBP20.89■□□□□ 0.94
PDLIM7-202ENST00000355841 PARP1P09874 1014 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 STAT2P52630 851 aa20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 SNAP25P60880 206 aa20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 TOB2Q14106 344 aaPredicted RBP20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 MICU3Q86XE3 530 aa20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 UBA5Q9GZZ9 404 aa20.89■□□□□ 0.93
PDLIM7-202ENST00000355841 KLF18A0A0U1RQI7 1052 aa20.88■□□□□ 0.93
PDLIM7-202ENST00000355841 GPR25O00155 361 aa20.88■□□□□ 0.93
PDLIM7-202ENST00000355841 NEK4P51957 841 aa20.88■□□□□ 0.93
PDLIM7-202ENST00000355841 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
PDLIM7-202ENST00000355841 BTBD7Q9P203 1132 aa20.88■□□□□ 0.93
PDLIM7-202ENST00000355841 MAD2L2Q9UI95 211 aa20.88■□□□□ 0.93
PDLIM7-202ENST00000355841 VWA5AO00534 786 aa20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 CNMDO75829 334 aa20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 HSPA8P11142 646 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-202ENST00000355841 BCRP11274 1271 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms