RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SERPINB6P35237 376 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 CCDC93Q567U6 631 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 DYMQ7RTS9 669 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 HIBCHQ6NVY1 386 aaPredicted RBP13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 STAMQ92783 540 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 CHL1O00533 1208 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 NLRP7Q8WX94 980 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 FOXO3O43524 673 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 NR1D1P20393 614 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 HMGB1P1B2RPK0 211 aaPredicted RBP13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 CTNND1O60716 968 aaKnown RBP13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 HEXIM1O94992 359 aaKnown RBP13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 SEPT2Q15019 361 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 WHAMMQ8TF30 809 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 USTQ9Y2C2 406 aa13.97□□□□□ -0.17
SYNCRIP-201ENST00000355238 RNF8O76064 485 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 NT5C3AQ9H0P0 336 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 EXOC5O00471 708 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 NPATQ14207 1427 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 H2AFZP0C0S5 128 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 ATP5JP18859 108 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 TIMM10P62072 90 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 CALCRLQ16602 461 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 H2AFVQ71UI9 128 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 EPB41L5Q9HCM4 733 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 MORC2Q9Y6X9 1032 aaPredicted RBP13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 MAP3K7O43318 606 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 ABCB6Q9NP58 842 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
SYNCRIP-201ENST00000355238 EXOC3O60645 756 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 MAN1A1P33908 653 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 SATB1Q01826 763 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANKRD20A4Q4UJ75 823 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANKRD20A8PQ5CZ79 823 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANKRD20A2Q5SQ80 823 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANKRD20A1Q5TYW2 823 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 ARHGEF18Q6ZSZ5 1173 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 DENND2AQ9ULE3 1009 aa13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.18
SYNCRIP-201ENST00000355238 ATF2P15336 505 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 IFNAR2P48551 515 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 ESRRGP62508 458 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 C11orf57Q6ZUT1 292 aaPredicted RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 CENPKQ9BS16 269 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 IRS4O14654 1257 aaPredicted RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 SART1O43290 800 aaKnown RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 PPP6R2O75170 966 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 NELFCDQ8IXH7 590 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 MYOCDQ8IZQ8 938 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZMAT2Q96NC0 199 aaKnown RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 PICALMQ13492 652 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 GPIHBP1Q8IV16 184 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 SCYL3Q8IZE3 742 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 HAUS8Q9BT25 410 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 ENC1O14682 589 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANGPTL2Q9UKU9 493 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 BZW2Q9Y6E2 419 aaKnown RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 CNGA1P29973 690 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 NBPF5PQ86XG9 351 aaPredicted RBP13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
SYNCRIP-201ENST00000355238 EIF3BP55884 814 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 RSAD2Q8WXG1 361 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ARMT1Q9H993 441 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZMYM6O95789 1325 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ARHGEF35A5YM69 484 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 SH3BP5O60239 455 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 VSTM4Q8IW00 320 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ABTB1Q969K4 478 aaPredicted RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 XAGE2Q96GT9 111 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 LMNAP02545 664 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 PTH1RQ03431 593 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 EHHADHQ08426 723 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 RBL2Q08999 1139 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 CASC4Q6P4E1 433 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 DRC3Q9H069 523 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 KDM5BQ9UGL1 1544 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 KIAA0232Q92628 1395 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 CREB3O43889 395 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 GCNT3O95395 438 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 FAM133BQ5BKY9 247 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 TRIM42Q8IWZ5 723 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms