RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 GOLGB1Q14789 3259 aaKnown RBP24.09■■□□□ 1.45
TRIM3-201ENST00000345851 ANKRD18BA2A2Z9 1011 aa24.09■■□□□ 1.45
TRIM3-201ENST00000345851 KRT9P35527 623 aa24.09■■□□□ 1.45
TRIM3-201ENST00000345851 SSRP1Q08945 709 aaKnown RBP24.09■■□□□ 1.45
TRIM3-201ENST00000345851 CUL4BQ13620 913 aa24.09■■□□□ 1.45
TRIM3-201ENST00000345851 SAFBQ15424 915 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRIM3-201ENST00000345851 BCAS4Q8TDM0 211 aa24.09■■□□□ 1.45
TRIM3-201ENST00000345851 SECISBP2LQ93073 1101 aaKnown RBP24.09■■□□□ 1.45
TRIM3-201ENST00000345851 CTAGE1Q96RT6 745 aa24.09■■□□□ 1.45
TRIM3-201ENST00000345851 GPR108Q9NPR9 543 aa24.09■■□□□ 1.45
TRIM3-201ENST00000345851 FAM217BQ9NTX9 383 aaPredicted RBP24.09■■□□□ 1.45
TRIM3-201ENST00000345851 A0A087X0B3 334 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 AGPSO00116 658 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 CAMTA2O94983 1202 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 TRAPPC11Q7Z392 1133 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 CMTR1Q8N1G2 835 aaKnown RBP24.08■■□□□ 1.45
TRIM3-201ENST00000345851 MYO1AQ9UBC5 1043 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 CTNND2Q9UQB3 1225 aa24.08■■□□□ 1.45
TRIM3-201ENST00000345851 HNRNPH1P31943 449 aaKnown RBP24.08■■□□□ 1.44
TRIM3-201ENST00000345851 CCDC51Q96ER9 411 aa24.08■■□□□ 1.44
TRIM3-201ENST00000345851 EPSTI1Q96J88 318 aa24.08■■□□□ 1.44
TRIM3-201ENST00000345851 SELENOOQ9BVL4 669 aa24.08■■□□□ 1.44
TRIM3-201ENST00000345851 TAB2Q9NYJ8 693 aa24.08■■□□□ 1.44
TRIM3-201ENST00000345851 RIPOR2Q9Y4F9 1068 aa24.08■■□□□ 1.44
TRIM3-201ENST00000345851 SAMM50Q9Y512 469 aa24.08■■□□□ 1.44
TRIM3-201ENST00000345851 FAM107BQ9H098 131 aa24.07■■□□□ 1.44
TRIM3-201ENST00000345851 PDE8AO60658 829 aa24.07■■□□□ 1.44
TRIM3-201ENST00000345851 KRT31Q15323 416 aa24.07■■□□□ 1.44
TRIM3-201ENST00000345851 VPS72Q15906 364 aa24.07■■□□□ 1.44
TRIM3-201ENST00000345851 SWT1Q5T5J6 900 aaKnown RBP24.07■■□□□ 1.44
TRIM3-201ENST00000345851 KANK3Q6NY19 840 aa24.07■■□□□ 1.44
TRIM3-201ENST00000345851 REXO2Q9Y3B8 237 aaKnown RBP24.07■■□□□ 1.44
TRIM3-201ENST00000345851 DPYDQ12882 1025 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 TMEM67Q5HYA8 995 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 KCNV1Q6PIU1 500 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 SPATA20Q8TB22 786 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 ZFYP08048 801 aaPredicted RBP24.06■■□□□ 1.44
TRIM3-201ENST00000345851 CCDC24Q8N4L8 307 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 CAGE1Q8TC20 777 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 CEP89Q96ST8 783 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 SAR1BQ9Y6B6 198 aa24.06■■□□□ 1.44
TRIM3-201ENST00000345851 MMP1P03956 469 aa24.05■■□□□ 1.44
TRIM3-201ENST00000345851 EPN1Q9Y6I3 576 aaPredicted RBP24.05■■□□□ 1.44
TRIM3-201ENST00000345851 GOLGA6BA6NDN3 693 aa24.05■■□□□ 1.44
TRIM3-201ENST00000345851 SHOX2O60902 331 aaPredicted RBP24.05■■□□□ 1.44
TRIM3-201ENST00000345851 WDR19Q8NEZ3 1342 aa24.05■■□□□ 1.44
TRIM3-201ENST00000345851 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
TRIM3-201ENST00000345851 OXER1Q8TDS5 423 aa24.05■■□□□ 1.44
TRIM3-201ENST00000345851 CXorf56Q9H5V9 222 aa24.05■■□□□ 1.44
TRIM3-201ENST00000345851 ZNF185O15231 689 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 NDUFA10O95299 355 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 FECHP22830 423 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 GNGT1P63211 74 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 CAPS2Q9BXY5 557 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 CABP5Q9NP86 173 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 SRPRBQ9Y5M8 271 aaKnown RBP24.04■■□□□ 1.44
TRIM3-201ENST00000345851 PPP1R3GB7ZBB8 358 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 CHRM1P11229 460 aaPredicted RBP24.04■■□□□ 1.44
TRIM3-201ENST00000345851 MCM3P25205 808 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 RILPL1Q5EBL4 403 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 ANKRD20A12PQ8NF67 263 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 ECM29Q5VYK3 1845 aa24.04■■□□□ 1.44
TRIM3-201ENST00000345851 INPP5BP32019 993 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 MAP2K2P36507 400 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 CCDC122Q5T0U0 273 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 PAGE5Q96GU1 130 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 LY9Q9HBG7 655 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 SLC12A7Q9Y666 1083 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 MRPS25P82663 173 aaKnown RBP24.03■■□□□ 1.44
TRIM3-201ENST00000345851 IGDCC4Q8TDY8 1250 aa24.03■■□□□ 1.44
TRIM3-201ENST00000345851 SHTN1A0MZ66 631 aa24.02■■□□□ 1.44
TRIM3-201ENST00000345851 FAM205CA6NFA0 338 aa24.02■■□□□ 1.44
TRIM3-201ENST00000345851 PES1O00541 588 aaKnown RBP24.02■■□□□ 1.44
TRIM3-201ENST00000345851 CT47A1Q5JQC4 288 aaPredicted RBP24.02■■□□□ 1.44
TRIM3-201ENST00000345851 GNL3LQ9NVN8 582 aaKnown RBP24.02■■□□□ 1.44
TRIM3-201ENST00000345851 ITIH6Q6UXX5 1313 aa24.02■■□□□ 1.44
TRIM3-201ENST00000345851 C2orf54Q08AI8 447 aa24.02■■□□□ 1.44
TRIM3-201ENST00000345851 TICAM2Q86XR7 235 aa24.02■■□□□ 1.44
TRIM3-201ENST00000345851 AMIGO3Q86WK7 504 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 JAKMIP2Q96AA8 810 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 BLZF1Q9H2G9 400 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 IFIT3O14879 490 aaKnown RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 HSPA1LP34931 641 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 COPB1P53618 953 aaKnown RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 PPFIA1Q13136 1202 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 CCNI2Q6ZMN8 369 aaPredicted RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 RRP36Q96EU6 259 aaKnown RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 PDE2AO00408 941 aaPredicted RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 PSMD14O00487 310 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 FMNL1O95466 1100 aaPredicted RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 MCAMP43121 646 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 SND1Q7KZF4 910 aaKnown RBP eCLIP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 POLD4Q9HCU8 107 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 SRP68Q9UHB9 627 aaKnown RBP24.01■■□□□ 1.43
TRIM3-201ENST00000345851 MAPK8IP1Q9UQF2 711 aa24.01■■□□□ 1.43
TRIM3-201ENST00000345851 WTIPA6NIX2 430 aaPredicted RBP24■■□□□ 1.43
TRIM3-201ENST00000345851 FKBP15Q5T1M5 1219 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms