RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
SHISA2-201ENST00000319420 TMC4Q7Z404 712 aa18.21■□□□□ 0.51
SHISA2-201ENST00000319420 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
SHISA2-201ENST00000319420 A0A087X0B3 334 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
SHISA2-201ENST00000319420 UIMC1Q96RL1 719 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 SERPINB13Q9UIV8 391 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 CEP131Q9UPN4 1083 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 SCAF8Q9UPN6 1271 aaKnown RBP18.2■□□□□ 0.5
SHISA2-201ENST00000319420 SLC16A2P36021 539 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 NAPAP54920 295 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 GRM4Q14833 912 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 PIGSQ96S52 555 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 COBLO75128 1261 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 BLIDQ8IZY5 108 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
SHISA2-201ENST00000319420 FAM163AQ96GL9 167 aaPredicted RBP18.2■□□□□ 0.5
SHISA2-201ENST00000319420 CCDC194A0A1B0GVG4 234 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 GOLGA6L6A8MZA4 724 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 CAVIN2O95810 425 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 ATP1A3P13637 1013 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 SRPRBQ9Y5M8 271 aaKnown RBP18.19■□□□□ 0.5
SHISA2-201ENST00000319420 MYH6P13533 1939 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 RAD17O75943 681 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 TRMT44Q8IYL2 757 aaKnown RBP18.19■□□□□ 0.5
SHISA2-201ENST00000319420 RASSF8Q8NHQ8 419 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 SNED1Q8TER0 1413 aa18.19■□□□□ 0.5
SHISA2-201ENST00000319420 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 NLRP12P59046 1061 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 KLHL10Q6JEL2 608 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 RGS22Q8NE09 1264 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
SHISA2-201ENST00000319420 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 CACTINQ8WUQ7 758 aaKnown RBP18.18■□□□□ 0.5
SHISA2-201ENST00000319420 COA7Q96BR5 231 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 KIAA1551Q9HCM1 1747 aa18.18■□□□□ 0.5
SHISA2-201ENST00000319420 POSTNQ15063 836 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 CCDC96Q2M329 555 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
SHISA2-201ENST00000319420 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
SHISA2-201ENST00000319420 IFNKQ9P0W0 207 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 DDTLA6NHG4 134 aaPredicted RBP18.17■□□□□ 0.5
SHISA2-201ENST00000319420 PP2D1A8MPX8 630 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 TTBK2Q6IQ55 1244 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
SHISA2-201ENST00000319420 PODNQ7Z5L7 613 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 TNFRSF25Q93038 417 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 BLZF1Q9H2G9 400 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 SEC63Q9UGP8 760 aaKnown RBP18.17■□□□□ 0.5
SHISA2-201ENST00000319420 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SHISA2-201ENST00000319420 GDF11O95390 407 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 BMP6P22004 513 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 SARM1Q6SZW1 724 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 SPTLC3Q9NUV7 552 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 BIN2Q9UBW5 565 aaPredicted RBP18.16■□□□□ 0.5
SHISA2-201ENST00000319420 CLRN2A0PK11 232 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 PALM3A6NDB9 673 aaPredicted RBP18.16■□□□□ 0.5
SHISA2-201ENST00000319420 TOP1P11387 765 aaKnown RBP18.16■□□□□ 0.5
SHISA2-201ENST00000319420 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 CAMKK2Q96RR4 588 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 MTMR4Q9NYA4 1195 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 ZBTB12Q9Y330 459 aaPredicted RBP18.16■□□□□ 0.5
SHISA2-201ENST00000319420 HLA-DOAP06340 250 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 GNAQP50148 359 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 TMED8Q6PL24 325 aaPredicted RBP18.16■□□□□ 0.5
SHISA2-201ENST00000319420 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 ZNF277Q9NRM2 450 aaPredicted RBP18.16■□□□□ 0.5
SHISA2-201ENST00000319420 PCDHA4Q9UN74 947 aa18.16■□□□□ 0.5
SHISA2-201ENST00000319420 SMCO2A6NFE2 343 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.15■□□□□ 0.5
SHISA2-201ENST00000319420 UQCRHLA0A096LP55 91 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 UQCRHP07919 91 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 PDHBP11177 359 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
SHISA2-201ENST00000319420 IL17AQ16552 155 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 CREBRFQ8IUR6 639 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 RRP36Q96EU6 259 aaKnown RBP18.15■□□□□ 0.5
SHISA2-201ENST00000319420 XPO4Q9C0E2 1151 aaKnown RBP18.15■□□□□ 0.5
SHISA2-201ENST00000319420 TMEM260Q9NX78 707 aa18.15■□□□□ 0.5
SHISA2-201ENST00000319420 STXBP3O00186 592 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 TPM3P06753 285 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 SHMT1P34896 483 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 STX17P56962 302 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 SNAP25P60880 206 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 DACT2Q5SW24 774 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 CERS3Q8IU89 383 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 SMARCE1Q969G3 411 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 CNKSR1Q969H4 720 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 ZBTB7AO95365 584 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 CALML3P27482 149 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 TIGD1Q96MW7 591 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 MAN1B1Q9UKM7 699 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 PCDHA6Q9UN73 950 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 PCDHA8Q9Y5H6 950 aa18.14■□□□□ 0.49
SHISA2-201ENST00000319420 TPM2P07951 284 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms