RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 NPHP1O15259 732 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 CASQ1P31415 396 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 ITIH3Q06033 890 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 KRT31Q15323 416 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 C6orf89Q6UWU4 347 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 TOM1L2Q6ZVM7 507 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 FBXO33Q7Z6M2 555 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 GOLGA1Q92805 767 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 EPSTI1Q96J88 318 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 SH3GLB2Q9NR46 395 aa6.19□□□□□ -1.42
VPS50-202ENST00000305866 CNTNAP5Q8WYK1 1306 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 GOLGA6L9A6NEM1 432 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 CCP110O43303 1012 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 DDAH1O94760 285 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 CASP14P31944 242 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 MAGEA9P43362 315 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 TRAPPC10P48553 1259 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 CHMP4BP1P59074 171 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 SKOR1P84550 965 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 ATP2C1P98194 919 aaPredicted RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 EHHADHQ08426 723 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 TTMPQ5BVD1 217 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 RILPL1Q5EBL4 403 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 JMYQ8N9B5 988 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 KRI1Q8N9T8 703 aaKnown RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 EXOC5O00471 708 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 URI1O94763 535 aaPredicted RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 BMP15O95972 392 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 RXRAP19793 462 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 RASGRF1Q13972 1273 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 UBE4AQ14139 1066 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 KANK3Q6NY19 840 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 UBXN4Q92575 508 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 EHD4Q9H223 541 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 MYO1AQ9UBC5 1043 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 BPTFQ12830 3046 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 KDM4FA0A1W2PPD8 638 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 BECN2A8MW95 431 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 EIF3CLB5ME19 914 aaKnown RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 H0YGN5 161 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 ZSCAN12O43309 604 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 ATP1A1P05023 1023 aaKnown RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 CDK17Q00537 523 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 TROAPQ12815 778 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 ORC2Q13416 577 aaPredicted RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 STK38Q15208 465 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 JAKMIP3Q5VZ66 844 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 EIF3CQ99613 913 aaKnown RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 MYL10Q9BUA6 226 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 LACRTQ9GZZ8 138 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 ZBTB3Q9H5J0 574 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 BSDC1Q9NW68 430 aaPredicted RBP6.18□□□□□ -1.42
VPS50-202ENST00000305866 TMEM59LQ9UK28 342 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 NFS1Q9Y697 457 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 SIP14410 1827 aa6.18□□□□□ -1.42
VPS50-202ENST00000305866 B4E1Z4 1266 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 POLR3GO15318 223 aaPredicted RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 POLR2DO15514 142 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 CBFA2T2O43439 604 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 DEXIO95424 95 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TOP1P11387 765 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 PHKA1P46020 1223 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TUBB2AQ13885 445 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 SPRED3Q2MJR0 410 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 NCAPH2Q6IBW4 605 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 FAM228AQ86W67 206 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 FAM71BQ8TC56 605 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 HDAC7Q8WUI4 952 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 FBXW7Q969H0 707 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TUBB2BQ9BVA1 445 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TRIM34Q9BYJ4 488 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 LRRC4CQ9HCJ2 640 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 RBM28Q9NW13 759 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 GEMIN8Q9NWZ8 242 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 HDAC6Q9UBN7 1215 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 PSME4Q14997 1843 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 AKR1B15C9JRZ8 316 aaPredicted RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 CSB-PGBD3P0DP91 1061 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 GUCY2CP25092 1073 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 GNG11P61952 73 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 KARSQ15046 597 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 WHAMMP3Q1A5X7 153 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 SUSD4Q5VX71 490 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TTI2Q6NXR4 508 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 CCDC51Q96ER9 411 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 FAM89AQ96GI7 184 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 ARFGAP3Q9NP61 516 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 KCNJ14Q9UNX9 436 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 SNED1Q8TER0 1413 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 KAT6BQ8WYB5 2073 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 FAM205AQ6ZU69 1335 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 DOCK5Q9H7D0 1870 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 GOLGA6L4A6NEF3 574 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 RBAK-RBAKDNI3L0D1 243 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 ZEB2O60315 1214 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 MYL1P05976 194 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 CALM1P0DP23 149 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms