RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FCHSD1Q86WN1 690 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 SLC44A5Q8NCS7 719 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 FAM76AQ8TAV0 307 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 AFAP1L1Q8TED9 768 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 GPR108Q9NPR9 543 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 TRIM10Q9UDY6 481 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 GOLGA6CA6NDK9 693 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 EBAG9O00559 213 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 CIAO1O76071 339 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 GOLGA6DP0CG33 693 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 SCG2P13521 617 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 RESP18Q5W5W9 173 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 HPS3Q969F9 1004 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 RRP36Q96EU6 259 aaKnown RBP14.88□□□□□ -0.03
CASC4-201ENST00000299957 IFIH1Q9BYX4 1025 aaKnown RBP14.88□□□□□ -0.03
CASC4-201ENST00000299957 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 GOLGA6AQ9NYA3 693 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 LRWD1Q9UFC0 647 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 HPS5Q9UPZ3 1129 aa14.88□□□□□ -0.03
CASC4-201ENST00000299957 TCHHQ07283 1943 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 CHMP2AO43633 222 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 EHBP1Q8NDI1 1231 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 SNX29Q8TEQ0 813 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 SECISBP2LQ93073 1101 aaKnown RBP14.87□□□□□ -0.03
CASC4-201ENST00000299957 ZBTB21Q9ULJ3 1066 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 TCP10Q12799 353 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 KRT31Q15323 416 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 RABL6Q3YEC7 729 aaPredicted RBP14.87□□□□□ -0.03
CASC4-201ENST00000299957 BLIDQ8IZY5 108 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
CASC4-201ENST00000299957 FERMT2Q96AC1 680 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 FAM204AQ9H8W3 233 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 MRPL44Q9H9J2 332 aaKnown RBP14.87□□□□□ -0.03
CASC4-201ENST00000299957 MROH5Q6ZUA9 1318 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 GOLGA6BA6NDN3 693 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 SLFN14P0C7P3 912 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 HERC4Q5GLZ8 1057 aaPredicted RBP14.87□□□□□ -0.03
CASC4-201ENST00000299957 SV2BQ7L1I2 683 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 SAMM50Q9Y512 469 aa14.87□□□□□ -0.03
CASC4-201ENST00000299957 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 ERLIN2O94905 339 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 PARP1P09874 1014 aaKnown RBP14.86□□□□□ -0.03
CASC4-201ENST00000299957 NEFHP12036 1026 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 PTPREP23469 700 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 C8orf74Q6P047 294 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 RDH13Q8NBN7 331 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 ABCA9Q8IUA7 1624 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 NDUFAB1O14561 156 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 MCM3P25205 808 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 PRDX5P30044 214 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 TPTE2Q6XPS3 522 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 ENOX1Q8TC92 643 aaKnown RBP14.86□□□□□ -0.03
CASC4-201ENST00000299957 RABGGTAQ92696 567 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 RBM28Q9NW13 759 aaKnown RBP14.86□□□□□ -0.03
CASC4-201ENST00000299957 ADGRB2O60241 1585 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 FGFR1OPO95684 399 aaKnown RBP14.86□□□□□ -0.03
CASC4-201ENST00000299957 LDHCP07864 332 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 LIG3P49916 1009 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 FAM98CQ17RN3 349 aaKnown RBP14.86□□□□□ -0.03
CASC4-201ENST00000299957 CFAP58Q5T655 872 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 CCDC25Q86WR0 208 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 UHMK1Q8TAS1 419 aaKnown RBP14.86□□□□□ -0.03
CASC4-201ENST00000299957 ADAM21Q9UKJ8 722 aa14.86□□□□□ -0.03
CASC4-201ENST00000299957 GOLGA6L7A0A1B0GV03 622 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 CTIFO43310 598 aaKnown RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 VAV2P52735 878 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 RPS8P62241 208 aaKnown RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 C2orf54Q08AI8 447 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 NAA35Q5VZE5 725 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 SMCR8Q8TEV9 937 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 CHP1Q99653 195 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 GSG1L2A8MUP6 293 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 KLRF2D3W0D1 207 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 GNAQP50148 359 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 GTF2A1P52655 376 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 CC2D1AQ6P1N0 951 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 ILDR1Q86SU0 546 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 SYCP3Q8IZU3 236 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 TUBGCP2Q9BSJ2 902 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 FOXP1Q9H334 677 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 TBC1D10BQ4KMP7 808 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 USP17L2Q6R6M4 530 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 CEP57Q86XR8 500 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 RIN2Q8WYP3 895 aaPredicted RBP14.85□□□□□ -0.03
CASC4-201ENST00000299957 DEPDC5O75140 1603 aa14.85□□□□□ -0.03
CASC4-201ENST00000299957 CEMIPQ8WUJ3 1361 aa14.84□□□□□ -0.03
CASC4-201ENST00000299957 IVLP07476 585 aa14.84□□□□□ -0.03
CASC4-201ENST00000299957 KRT13P13646 458 aa14.84□□□□□ -0.03
CASC4-201ENST00000299957 GJC1P36383 396 aa14.84□□□□□ -0.03
CASC4-201ENST00000299957 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 ZYXQ15942 572 aaKnown RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 SRPRBQ9Y5M8 271 aaKnown RBP14.84□□□□□ -0.03
CASC4-201ENST00000299957 UFL1O94874 794 aa14.84□□□□□ -0.03
CASC4-201ENST00000299957 FXR1P51114 621 aaKnown RBP eCLIP14.84□□□□□ -0.03
CASC4-201ENST00000299957 USH1GQ495M9 461 aa14.84□□□□□ -0.03
CASC4-201ENST00000299957 VPS36Q86VN1 386 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms