RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 GUCY2FP51841 1108 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 RAB14P61106 215 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 FSCBQ5H9T9 825 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 FGD4Q96M96 766 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 SLC38A10Q9HBR0 1119 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 RAD50Q92878 1312 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 TRMT1LQ7Z2T5 733 aaKnown RBP12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 THEMISQ8N1K5 641 aaPredicted RBP12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 CNGB3Q9NQW8 809 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 NAP1L4Q99733 375 aaKnown RBP12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 CTNND2Q9UQB3 1225 aa12.25□□□□□ -0.45
HDGFL3-201ENST00000299633 BCAS4Q8TDM0 211 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 DNMT1P26358 1616 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 OLFM3Q96PB7 478 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 ELP1O95163 1332 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 WDR44Q5JSH3 913 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 KMT5BQ4FZB7 885 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 CCDC105Q8IYK2 499 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 TLK1Q9UKI8 766 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 ATP11BQ9Y2G3 1177 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 GADD45BO75293 160 aaPredicted RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 SYTL2Q9HCH5 934 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 CAB39Q9Y376 341 aaPredicted RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 TCP11Q8WWU5 503 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 TUBB6Q9BUF5 446 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 PACSIN2Q9UNF0 486 aaPredicted RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 ICE2Q659A1 982 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 KIF17Q9P2E2 1029 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 IARSP41252 1262 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 LRRC8CQ8TDW0 803 aa12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 SECISBP2LQ93073 1101 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-201ENST00000299633 TAF12Q16514 161 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 HDAC11Q96DB2 347 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 RAPGEF1Q13905 1077 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 PPP6R3Q5H9R7 873 aaPredicted RBP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 ORC3Q9UBD5 711 aaPredicted RBP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 ST13P50502 369 aaKnown RBP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 SUCLA2Q9P2R7 463 aaPredicted RBP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 DOCK8Q8NF50 2099 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 ZNF263O14978 683 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 PDE11AQ9HCR9 933 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 TTC21BQ7Z4L5 1316 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 COG4Q9H9E3 785 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 IPO11Q9UI26 975 aaKnown RBP12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 DUOX2Q9NRD8 1548 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 CAPN1P07384 714 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 KRT2P35908 639 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 MCF2L2Q86YR7 1114 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 GINS4Q9BRT9 223 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 ING2Q9H160 280 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 ASIC2Q16515 512 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 KDM5BQ9UGL1 1544 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 UBAP1Q9NZ09 502 aa12.23□□□□□ -0.45
HDGFL3-201ENST00000299633 THAP12O43422 761 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 PDHA1P08559 390 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 PDE6BP35913 854 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 MFSD6Q6ZSS7 791 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 GUCY2CP25092 1073 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 KNTC1P50748 2209 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 ADCK1Q86TW2 530 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 NSMCE1Q8WV22 266 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 KIF22Q14807 665 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 C10orf88Q9H8K7 445 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 PSMD2Q13200 908 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 RSAD2Q8WXG1 361 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 ZNF215Q9UL58 517 aaPredicted RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 CEP55Q53EZ4 464 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 JARID2Q92833 1246 aaPredicted RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 KLHL31Q9H511 634 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 ZC3H12BQ5HYM0 836 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 DNAJC17Q9NVM6 304 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 LRRC8BQ6P9F7 803 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 CCHCR1Q8TD31 782 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 IL9RQ01113 521 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
HDGFL3-201ENST00000299633 KRT73Q86Y46 540 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms