RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 CD2BP2O95400 341 aaKnown RBP19.12■□□□□ 0.65
CDCP1-201ENST00000296129 H7C1D1 291 aa19.12■□□□□ 0.65
CDCP1-201ENST00000296129 NLRX1Q86UT6 975 aa19.12■□□□□ 0.65
CDCP1-201ENST00000296129 PSMB7Q99436 277 aa19.12■□□□□ 0.65
CDCP1-201ENST00000296129 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 PTPN12Q05209 780 aaKnown RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 FAM182BQ5T319 152 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 ARHGEF16Q5VV41 709 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 RDH13Q8NBN7 331 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 SYMPKQ92797 1274 aaKnown RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 AS3MTQ9HBK9 375 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 NLRC4Q9NPP4 1024 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 CARMIL3Q8ND23 1372 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 TESPA1A2RU30 521 aaPredicted RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 TNFAIP1Q13829 316 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 GALNT17Q6IS24 598 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 FBF1Q8TES7 1133 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 OGFRQ9NZT2 677 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 BCRP11274 1271 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 ALAS1P13196 640 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 ELF2Q15723 593 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 TIGD1Q96MW7 591 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 PCDHA12Q9UN75 941 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 ARAP3Q8WWN8 1544 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 GLI2P10070 1586 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 POLR2MP0CAP2 368 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 BRDTQ58F21 947 aaPredicted RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 CCDC84Q86UT8 332 aaPredicted RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 FBXO11Q86XK2 927 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 GPHNQ9NQX3 736 aaPredicted RBP19.11■□□□□ 0.65
CDCP1-201ENST00000296129 TXNDC16Q9P2K2 825 aa19.11■□□□□ 0.65
CDCP1-201ENST00000296129 GNA14O95837 355 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 MYOCDQ8IZQ8 938 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 UTP11Q9Y3A2 253 aaKnown RBP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PCDHB13Q9Y5F0 798 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 ARHGAP44Q17R89 818 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PIGBQ92521 554 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 ATG3Q9NT62 314 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 LRMPQ12912 555 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 TRIM6Q9C030 488 aaPredicted RBP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 FMNL1O95466 1100 aaPredicted RBP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 FAM102BQ5T8I3 360 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 SLFN12Q8IYM2 578 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 CEP63Q96MT8 703 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PUS7LQ9H0K6 701 aaKnown RBP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 CSRNP2Q9H175 543 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 FAM170AA1A519 330 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 SORBS3O60504 671 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 MRPS9P82933 396 aaKnown RBP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PTGDRQ13258 359 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 CPLX4Q7Z7G2 160 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PANK4Q9NVE7 773 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 TRPC5Q9UL62 973 aaPredicted RBP19.1■□□□□ 0.65
CDCP1-201ENST00000296129 NOD1Q9Y239 953 aa19.1■□□□□ 0.65
CDCP1-201ENST00000296129 PRKAB2O43741 272 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 FLOT1O75955 427 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 ERCC5P28715 1186 aaPredicted RBP19.09■□□□□ 0.65
CDCP1-201ENST00000296129 CYP2J2P51589 502 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 SLC8A3P57103 927 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 SLFN13Q68D06 897 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 LCORLQ8N3X6 602 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 ARFGAP2Q8N6H7 521 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 FBXO18Q8NFZ0 1043 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 CEP104O60308 925 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 TAF12Q16514 161 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 APOA5Q6Q788 366 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 NLGN1Q8N2Q7 840 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 MRPL11Q9Y3B7 192 aaKnown RBP19.09■□□□□ 0.65
CDCP1-201ENST00000296129 KRT19P08727 400 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 POLA2Q14181 598 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 CCDC121Q6ZUS5 278 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 SERPINA10Q9UK55 444 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 FAM169AQ9Y6X4 670 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 TRIM37O94972 964 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 OTUD6AQ7L8S5 288 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 NSUN7Q8NE18 718 aaKnown RBP19.09■□□□□ 0.65
CDCP1-201ENST00000296129 USTQ9Y2C2 406 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 SPHKAPQ2M3C7 1700 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 DNM2P50570 870 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 ZBTB16Q05516 673 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 TRIM31Q9BZY9 425 aa19.09■□□□□ 0.65
CDCP1-201ENST00000296129 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.65
CDCP1-201ENST00000296129 SERPINB2P05120 415 aa19.08■□□□□ 0.65
CDCP1-201ENST00000296129 GTPBP6O43824 516 aaPredicted RBP19.08■□□□□ 0.65
CDCP1-201ENST00000296129 KLHL7Q8IXQ5 586 aa19.08■□□□□ 0.65
CDCP1-201ENST00000296129 CNKSR1Q969H4 720 aa19.08■□□□□ 0.65
CDCP1-201ENST00000296129 IFIH1Q9BYX4 1025 aaKnown RBP19.08■□□□□ 0.65
CDCP1-201ENST00000296129 RPN1P04843 607 aaKnown RBP19.08■□□□□ 0.64
CDCP1-201ENST00000296129 UAP1Q16222 522 aaPredicted RBP19.08■□□□□ 0.64
CDCP1-201ENST00000296129 ABCB5Q2M3G0 1257 aa19.08■□□□□ 0.64
CDCP1-201ENST00000296129 MCTP2Q6DN12 878 aa19.08■□□□□ 0.64
CDCP1-201ENST00000296129 RTEL1Q9NZ71 1219 aa19.08■□□□□ 0.64
CDCP1-201ENST00000296129 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.64
CDCP1-201ENST00000296129 OSBP2Q969R2 916 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms