RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 BICD2Q8TD16 824 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 GPKOWQ92917 476 aaPredicted RBP eCLIP26.31■■□□□ 1.8
PTX3-201ENST00000295927 SYT17Q9BSW7 474 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 SH3GLB2Q9NR46 395 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 PGAP2Q9UHJ9 254 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 GOLGA6L3A6NEY3 463 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 GH2P01242 217 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 ME1P48163 572 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 SF3A1Q15459 793 aaKnown RBP26.31■■□□□ 1.8
PTX3-201ENST00000295927 GAS2L3Q86XJ1 694 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 SIAH1Q8IUQ4 282 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 KCNG4Q8TDN1 519 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 BRMS1Q9HCU9 246 aa26.31■■□□□ 1.8
PTX3-201ENST00000295927 SYCE3A1L190 88 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 SPTLC2O15270 562 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 TNNI2P48788 182 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 NLRP5P59047 1200 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 ICA1Q05084 483 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 TBC1D10BQ4KMP7 808 aaPredicted RBP26.3■■□□□ 1.8
PTX3-201ENST00000295927 UBA5Q9GZZ9 404 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 CABP5Q9NP86 173 aa26.3■■□□□ 1.8
PTX3-201ENST00000295927 TOB1P50616 345 aaPredicted RBP26.29■■□□□ 1.8
PTX3-201ENST00000295927 ZNF543Q08ER8 600 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 GPCPD1Q9NPB8 672 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 PCDHA7Q9UN72 937 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 TBC1D12O60347 775 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 SLC39A14Q15043 492 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 WWC2Q6AWC2 1192 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 RIOX1Q9H6W3 641 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 VAT1LQ9HCJ6 419 aa26.29■■□□□ 1.8
PTX3-201ENST00000295927 RASA3Q14644 834 aa26.28■■□□□ 1.8
PTX3-201ENST00000295927 RILPL1Q5EBL4 403 aa26.28■■□□□ 1.8
PTX3-201ENST00000295927 RRP36Q96EU6 259 aaKnown RBP26.28■■□□□ 1.8
PTX3-201ENST00000295927 SCAF8Q9UPN6 1271 aaKnown RBP26.28■■□□□ 1.8
PTX3-201ENST00000295927 PTPAQ15257 358 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 TYW1BQ6NUM6 668 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 ILDR2Q71H61 639 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 HEATR3Q7Z4Q2 680 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 TNFRSF25Q93038 417 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 BARHL2Q9NY43 387 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 TNFAIP1Q13829 316 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 KIF4BQ2VIQ3 1234 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 MIGA2Q7L4E1 593 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 HOMER1Q86YM7 354 aa26.27■■□□□ 1.8
PTX3-201ENST00000295927 CCAR1Q8IX12 1150 aaKnown RBP26.27■■□□□ 1.8
PTX3-201ENST00000295927 ISY1Q9ULR0 285 aaKnown RBP26.27■■□□□ 1.8
PTX3-201ENST00000295927 ASTN2O75129 1339 aaPredicted RBP26.26■■□□□ 1.8
PTX3-201ENST00000295927 STXBP3O00186 592 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 CALML3P27482 149 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 CCDC96Q2M329 555 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 EARS2Q5JPH6 523 aaKnown RBP26.26■■□□□ 1.79
PTX3-201ENST00000295927 GPATCH4Q5T3I0 446 aaKnown RBP26.26■■□□□ 1.79
PTX3-201ENST00000295927 ADALQ6DHV7 355 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 PIGSQ96S52 555 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 DACT1Q9NYF0 836 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 FAM205CA6NFA0 338 aa26.26■■□□□ 1.79
PTX3-201ENST00000295927 SEC63Q9UGP8 760 aaKnown RBP26.26■■□□□ 1.79
PTX3-201ENST00000295927 H7C1D1 291 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 MAP3K10Q02779 954 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 SLFN13Q68D06 897 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 TTBK2Q6IQ55 1244 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 LRSAM1Q6UWE0 723 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 KCTD1Q719H9 257 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 GPC2Q8N158 579 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 CCDC148Q8NFR7 591 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 HACL1Q9UJ83 578 aa26.25■■□□□ 1.79
PTX3-201ENST00000295927 ADAMTS3O15072 1205 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 NR1I2O75469 434 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 DCAF4Q8WV16 495 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 PCDHA4Q9UN74 947 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 A0A1W2PQ27 194 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 A0A1W2PQ64 194 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 A0A1W2PQD8 194 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 RAD21O60216 631 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 PPP6R2O75170 966 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 LETM1O95202 739 aaPredicted RBP26.24■■□□□ 1.79
PTX3-201ENST00000295927 MARCKSP29966 332 aaPredicted RBP26.24■■□□□ 1.79
PTX3-201ENST00000295927 NOM1Q5C9Z4 860 aaKnown RBP26.24■■□□□ 1.79
PTX3-201ENST00000295927 BLIDQ8IZY5 108 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 FAM177A1Q8N128 213 aaPredicted RBP26.24■■□□□ 1.79
PTX3-201ENST00000295927 TEPSINQ96N21 525 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 GOLPH3LQ9H4A5 285 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 ZBTB21Q9ULJ3 1066 aa26.24■■□□□ 1.79
PTX3-201ENST00000295927 GMCL1P1Q8NEA9 526 aa26.23■■□□□ 1.79
PTX3-201ENST00000295927 DDX19AQ9NUU7 478 aaKnown RBP26.23■■□□□ 1.79
PTX3-201ENST00000295927 GPRC5DQ9NZD1 345 aa26.23■■□□□ 1.79
PTX3-201ENST00000295927 PCDHB6Q9Y5E3 794 aa26.23■■□□□ 1.79
PTX3-201ENST00000295927 UTRNP46939 3433 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 F5H6K3 240 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 YBX3P16989 372 aaKnown RBP eCLIP26.22■■□□□ 1.79
PTX3-201ENST00000295927 KLRC3Q07444 240 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 AXDND1Q5T1B0 1012 aaPredicted RBP26.22■■□□□ 1.79
PTX3-201ENST00000295927 ADGRF4Q8IZF3 695 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 FSIP1Q8NA03 581 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 JMJD4Q9H9V9 463 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.22■■□□□ 1.79
PTX3-201ENST00000295927 ATP2B1P20020 1258 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 SLC16A2P36021 539 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 SLC1A4P43007 532 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 L1TD1Q5T7N2 865 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms