RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 BAG1Q99933 345 aaPredicted RBP28.47■■■□□ 2.15
ROM1-201ENST00000278833 DDX41Q9UJV9 622 aaKnown RBP28.47■■■□□ 2.15
ROM1-201ENST00000278833 SYNRGQ9UMZ2 1314 aa28.47■■■□□ 2.15
ROM1-201ENST00000278833 WNT7AO00755 349 aa28.46■■■□□ 2.15
ROM1-201ENST00000278833 CDK11BP21127 795 aaKnown RBP28.46■■■□□ 2.15
ROM1-201ENST00000278833 CTAGE1Q96RT6 745 aa28.46■■■□□ 2.15
ROM1-201ENST00000278833 TCP11L1Q9NUJ3 509 aa28.46■■■□□ 2.15
ROM1-201ENST00000278833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.46■■■□□ 2.15
ROM1-201ENST00000278833 PBX1P40424 430 aa28.46■■■□□ 2.15
ROM1-201ENST00000278833 NAA30Q147X3 362 aaPredicted RBP28.46■■■□□ 2.15
ROM1-201ENST00000278833 PANX2Q96RD6 677 aa28.46■■■□□ 2.15
ROM1-201ENST00000278833 PTGDRQ13258 359 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 C12orf60Q5U649 245 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 BICDL1Q6ZP65 573 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 TRMT44Q8IYL2 757 aaKnown RBP28.45■■■□□ 2.15
ROM1-201ENST00000278833 NLGN1Q8N2Q7 840 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 WDR66Q8TBY9 1149 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 PPP2R2CQ9Y2T4 447 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 LEMD3Q9Y2U8 911 aa28.45■■■□□ 2.15
ROM1-201ENST00000278833 GNAQP50148 359 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 CERS3Q8IU89 383 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 IQUBQ8NA54 791 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 DAGLBQ8NCG7 672 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 SPON1Q9HCB6 807 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 SAMSN1Q9NSI8 373 aaKnown RBP28.44■■■□□ 2.14
ROM1-201ENST00000278833 PPP1R3GB7ZBB8 358 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 NLRP5P59047 1200 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 PPP4CP60510 307 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 SEMA3FQ13275 785 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 GRM4Q14833 912 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 ZNF174Q15697 407 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 PDXDC2PQ6P474 469 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 ITIH6Q6UXX5 1313 aa28.44■■■□□ 2.14
ROM1-201ENST00000278833 NAA15Q9BXJ9 866 aaKnown RBP28.44■■■□□ 2.14
ROM1-201ENST00000278833 CDK5RAP2Q96SN8 1893 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 XDHP47989 1333 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 VWA3AA6NCI4 1184 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 TSPY2A6NKD2 308 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 GTPBP6O43824 516 aaPredicted RBP28.43■■■□□ 2.14
ROM1-201ENST00000278833 LONP1P36776 959 aaKnown RBP28.43■■■□□ 2.14
ROM1-201ENST00000278833 GALNT17Q6IS24 598 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 HOMER1Q86YM7 354 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 DNAI1Q9UI46 699 aa28.43■■■□□ 2.14
ROM1-201ENST00000278833 hCG_1642624A0A1W2PR95 340 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 CYP2D6P10635 497 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 PTGER2P43116 358 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 GSTO1P78417 241 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 UTP14CQ5TAP6 766 aaKnown RBP28.42■■■□□ 2.14
ROM1-201ENST00000278833 DZIP1Q86YF9 867 aaKnown RBP28.42■■■□□ 2.14
ROM1-201ENST00000278833 ADD3Q9UEY8 706 aaKnown RBP28.42■■■□□ 2.14
ROM1-201ENST00000278833 NMT2O60551 498 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 CD44P16070 742 aaKnown RBP28.42■■■□□ 2.14
ROM1-201ENST00000278833 FECHP22830 423 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 FAM47AQ5JRC9 791 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 SGIP1Q9BQI5 828 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 FAM53CQ9NYF3 392 aa28.42■■■□□ 2.14
ROM1-201ENST00000278833 H2AFXP16104 143 aaPredicted RBP28.41■■■□□ 2.14
ROM1-201ENST00000278833 EVX2Q03828 476 aa28.41■■■□□ 2.14
ROM1-201ENST00000278833 ELF2Q15723 593 aa28.41■■■□□ 2.14
ROM1-201ENST00000278833 NOM1Q5C9Z4 860 aaKnown RBP28.41■■■□□ 2.14
ROM1-201ENST00000278833 C4orf32Q8N8J7 132 aa28.41■■■□□ 2.14
ROM1-201ENST00000278833 KAT14Q9H8E8 782 aa28.41■■■□□ 2.14
ROM1-201ENST00000278833 M0R2N6 131 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 KMT5BQ4FZB7 885 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 BLIDQ8IZY5 108 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 ARID3AQ99856 593 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 PCDHA4Q9UN74 947 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 AFMP43652 599 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 PIK3AP1Q6ZUJ8 805 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 CCDC51Q96ER9 411 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 MCM9Q9NXL9 1143 aa28.4■■■□□ 2.14
ROM1-201ENST00000278833 AKR1B15C9JRZ8 316 aaPredicted RBP28.39■■■□□ 2.14
ROM1-201ENST00000278833 MMP10P09238 476 aa28.39■■■□□ 2.14
ROM1-201ENST00000278833 CBX1P83916 185 aa28.39■■■□□ 2.14
ROM1-201ENST00000278833 GRAPQ13588 217 aa28.39■■■□□ 2.14
ROM1-201ENST00000278833 GRAPLQ8TC17 118 aaPredicted RBP28.39■■■□□ 2.14
ROM1-201ENST00000278833 RMND1Q9NWS8 449 aa28.39■■■□□ 2.14
ROM1-201ENST00000278833 SPAG1Q07617 926 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 NFIXQ14938 502 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 IL17RBQ9NRM6 502 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 LIMA1Q9UHB6 759 aaKnown RBP28.38■■■□□ 2.13
ROM1-201ENST00000278833 RWDD2AQ9UIY3 292 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 LRRC10BA6NIK2 292 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 LDHBP07195 334 aaKnown RBP28.38■■■□□ 2.13
ROM1-201ENST00000278833 ZSCAN20P17040 1043 aaPredicted RBP28.38■■■□□ 2.13
ROM1-201ENST00000278833 FBXO38Q6PIJ6 1188 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 TXNRD3Q86VQ6 643 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 PNMA1Q8ND90 353 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 CCDC148Q8NFR7 591 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 LZTS2Q9BRK4 669 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 GTPBP4Q9BZE4 634 aaKnown RBP28.38■■■□□ 2.13
ROM1-201ENST00000278833 ZMYND15Q9H091 742 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 PARP3Q9Y6F1 533 aa28.38■■■□□ 2.13
ROM1-201ENST00000278833 MYL1P05976 194 aa28.37■■■□□ 2.13
ROM1-201ENST00000278833 IL17AQ16552 155 aa28.37■■■□□ 2.13
ROM1-201ENST00000278833 FILIP1LQ4L180 1135 aa28.37■■■□□ 2.13
ROM1-201ENST00000278833 FANCGO15287 622 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 BAG3O95817 575 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 USP17L8P0C7I0 530 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 POLD1P28340 1107 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms