RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 GOLGA8KD6RF30 607 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 ZKSCAN3Q9BRR0 538 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 FAM205CA6NFA0 338 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 SETQ01105 290 aaPredicted RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 PAK1Q13153 545 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 OR8K1Q8NGG5 319 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 AENQ8WTP8 325 aaKnown RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 NAPBQ9H115 298 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 BLZF1Q9H2G9 400 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 PIH1D3Q9NQM4 214 aaKnown RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 PARP4Q9UKK3 1724 aaKnown RBP16.8■□□□□ 0.28
XRCC1-201ENST00000262887 MEGF6O75095 1541 aa16.8■□□□□ 0.28
XRCC1-201ENST00000262887 NID2Q14112 1375 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 TTC26A0AVF1 554 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 HERVK_113P62684 666 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 TSR1Q2NL82 804 aaKnown RBP16.79■□□□□ 0.28
XRCC1-201ENST00000262887 IQCEQ6IPM2 695 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 CCDC70Q6NSX1 233 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 PRPF38AQ8NAV1 312 aaKnown RBP16.79■□□□□ 0.28
XRCC1-201ENST00000262887 GNL3LQ9NVN8 582 aaKnown RBP16.79■□□□□ 0.28
XRCC1-201ENST00000262887 BCL9LQ86UU0 1499 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 WTAPQ15007 396 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 ANKRD18AQ8IVF6 992 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 SH3GL2Q99962 352 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 CNNM2Q9H8M5 875 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
XRCC1-201ENST00000262887 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
XRCC1-201ENST00000262887 CYP27B1O15528 508 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 KRT86O43790 486 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 PDE6AP16499 860 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 ORAI2Q96SN7 254 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 LUC7L2Q9Y383 392 aaKnown RBP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 CAPN7Q9Y6W3 813 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 PES1O00541 588 aaKnown RBP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 OPA1O60313 960 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 A1BGP04217 495 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 KRT83P78385 493 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 IFIT5Q13325 482 aaKnown RBP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 AMOTL1Q8IY63 956 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 NELFBQ8WX92 580 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 KRT23Q9C075 422 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 RGPD5Q99666 1765 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 ERICH2A1L162 156 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 PDE2AO00408 941 aaPredicted RBP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 ZNF185O15231 689 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 TTC19Q6DKK2 380 aaPredicted RBP16.78■□□□□ 0.28
XRCC1-201ENST00000262887 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
XRCC1-201ENST00000262887 XDHP47989 1333 aa16.77■□□□□ 0.28
XRCC1-201ENST00000262887 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
XRCC1-201ENST00000262887 AKNAD1Q5T1N1 836 aa16.77■□□□□ 0.28
XRCC1-201ENST00000262887 CABS1Q96KC9 395 aa16.77■□□□□ 0.28
XRCC1-201ENST00000262887 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
XRCC1-201ENST00000262887 JADE2Q9NQC1 790 aa16.77■□□□□ 0.28
XRCC1-201ENST00000262887 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
XRCC1-201ENST00000262887 CCDC189A1A4V9 331 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 A6NNZ2 444 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 KIAA0754O94854 1291 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 XBP1P17861 261 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 TUBB8Q3ZCM7 444 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 ZNF662Q6ZS27 426 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 DNAJC7Q99615 494 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 HINFPQ9BQA5 517 aa16.77■□□□□ 0.27
XRCC1-201ENST00000262887 LRP6O75581 1613 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 H0YHG0 523 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 NDUFAB1O14561 156 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 IDEP14735 1019 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 ALX1Q15699 326 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 EARS2Q5JPH6 523 aaKnown RBP16.76■□□□□ 0.27
XRCC1-201ENST00000262887 RRP36Q96EU6 259 aaKnown RBP16.76■□□□□ 0.27
XRCC1-201ENST00000262887 TACC3Q9Y6A5 838 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 BMP15O95972 392 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 KRT2P35908 639 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
XRCC1-201ENST00000262887 OTUD6BQ8N6M0 293 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
XRCC1-201ENST00000262887 RIC1Q4ADV7 1423 aa16.75■□□□□ 0.27
XRCC1-201ENST00000262887 IPO7O95373 1038 aaKnown RBP16.75■□□□□ 0.27
XRCC1-201ENST00000262887 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
XRCC1-201ENST00000262887 SKOR1P84550 965 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms