RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NEK4P51957 841 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 C1orf220Q5T0J3 134 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 AKNAD1Q5T1N1 836 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 ANKRD18AQ8IVF6 992 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 MAPKAPK5Q8IW41 473 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 TGFBRAP1Q8WUH2 860 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 OTUD5Q96G74 571 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 NOL10Q9BSC4 688 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 AJAP1Q9UKB5 411 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 NME7Q9Y5B8 376 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 DOCK4Q8N1I0 1966 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 POTEB2H3BUK9 544 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 SPATA31C1P0DKV0 1188 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 FAM84AQ96KN4 292 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 NLRP3Q96P20 1036 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 BTBD7Q9P203 1132 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 RPTORQ8N122 1335 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 IQCF3P0C7M6 154 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 CDC25AP30304 524 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 TGFB2P61812 414 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 POTEHQ6S545 545 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 CRIPAKQ8N1N5 446 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 ZKSCAN4Q969J2 545 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 KLRG1Q96E93 195 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 P2RY11Q96G91 374 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 BLOC1S4Q9NUP1 217 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 TMEM260Q9NX78 707 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 ITGB5P18084 799 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 CLIC6Q96NY7 704 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 PCYT2Q99447 389 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 CD2APQ9Y5K6 639 aa6.77□□□□□ -1.33
TOPBP1-201ENST00000260810 MUM1L1Q5H9M0 696 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 TICAM2Q86XR7 235 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 FBXO18Q8NFZ0 1043 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 ACTN4O43707 911 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 INTS4Q96HW7 963 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 PNMA5Q96PV4 448 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 TAOK2Q9UL54 1235 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 MTCL1Q9Y4B5 1905 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 BTBD18B2RXH4 712 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 ARIH2O95376 493 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 MAPK7Q13164 816 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 MAP3K11Q16584 847 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 BTNL9Q6UXG8 535 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 KIF6Q6ZMV9 814 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 DHX32Q7L7V1 743 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 CCDC83Q8IWF9 413 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 PLEKHO2Q8TD55 490 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 SERPINA10Q9UK55 444 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 VAV3Q9UKW4 847 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 KCNJ14Q9UNX9 436 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 AFG3L2Q9Y4W6 797 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 BRWD1Q9NSI6 2320 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 ATP9AO75110 1047 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 JAKMIP1Q96N16 626 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 NEUROD6Q96NK8 337 aa6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 SLKQ9H2G2 1235 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-201ENST00000260810 DNAJC25-GNG10A0A024R161 153 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 ABLIM1O14639 778 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 PDLIM7Q9NR12 457 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 ZNF70Q9UC06 446 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 EML1O00423 815 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 MCM4P33991 863 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 CCT2P78371 535 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 ARID5BQ14865 1188 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 TMTC3Q6ZXV5 915 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 GRAMD1CQ8IYS0 662 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 USP6NLQ92738 828 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 SAP30BPQ9UHR5 308 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 TMEM150BA6NC51 233 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 LINC00301Q8NCQ3 95 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 NYNRINQ9P2P1 1898 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 CASP5P51878 434 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 PSMC6P62333 389 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 NEDD1Q8NHV4 660 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 ZFP91Q96JP5 570 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 COA1Q9GZY4 146 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 EHD4Q9H223 541 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
TOPBP1-201ENST00000260810 GMPSP49915 693 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 CEP135Q66GS9 1140 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 ZNF274Q96GC6 653 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 NMRK2Q9NPI5 230 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 NRG2O14511 850 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 LINC00271P0C7V0 271 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 NASPP49321 788 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 NT5DC1Q5TFE4 455 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 TAS1R3Q7RTX0 852 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 CCDC144CPQ8IYA2 1237 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 WNT8BQ93098 351 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 BORCS6Q96GS4 357 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 MORC2Q9Y6X9 1032 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 ADGRA3Q8IWK6 1321 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 SCN8AQ9UQD0 1980 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 KCNA1Q09470 495 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 DPF2Q92785 391 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 ARXQ96QS3 562 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 CEP126Q9P2H0 1117 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms