RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 COL9A3Q14050 684 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-201ENST00000249837 TTLL11Q8NHH1 800 aa5.15□□□□□ -1.59
VPS13C-201ENST00000249837 SOS2Q07890 1332 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-201ENST00000249837 NDUFAB1O14561 156 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 PPP6R2O75170 966 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SCG2P13521 617 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 INPP5BP32019 993 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CCZ1BP86790 482 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CCZ1P86791 482 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CNNM4Q6P4Q7 775 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SHC4Q6S5L8 630 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 FCHSD1Q86WN1 690 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SLF2Q8IX21 1173 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 TBC1D5Q92609 795 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 FBXO3Q9UK99 471 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SRPRBQ9Y5M8 271 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CD163L1Q9NR16 1453 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 FAM205CA6NFA0 338 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 HERC4Q5GLZ8 1057 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SFMBT2Q5VUG0 894 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 PIGBQ92521 554 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 IFIH1Q9BYX4 1025 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 FRMPD2Q68DX3 1309 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SALL3Q9BXA9 1300 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ARFGAP2Q8N6H7 521 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 TRIML1Q8N9V2 468 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SNX29Q8TEQ0 813 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ANKRD7Q92527 254 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 PANX2Q96RD6 677 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 NUP58Q9BVL2 599 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SENP2Q9HC62 589 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 PKD2L1Q9P0L9 805 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 BIN2Q9UBW5 565 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 LRWD1Q9UFC0 647 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 MKRN1Q9UHC7 482 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ZBTB1Q9Y2K1 713 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 HEG1Q9ULI3 1381 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SLFN14P0C7P3 912 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 RPS8P62241 208 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ST3GAL1Q11201 340 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC121Q6ZUS5 278 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SCLT1Q96NL6 688 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SELENOSQ9BQE4 189 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ANKRD2Q9GZV1 360 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC87Q9NVE4 849 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 MYH8P13535 1937 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 OVOS2A0A0J9YW53 1432 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 FAM13AO94988 1023 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 PTPREP23469 700 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CXCR5P32302 372 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 OVOS2Q6IE36 1432 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CPLX4Q7Z7G2 160 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CEP57Q86XR8 500 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 EPSTI1Q96J88 318 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 C8orf74Q6P047 294 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 GIGYF2Q6Y7W6 1299 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 KLHL34Q8N239 644 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 RRP15Q9Y3B9 282 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SAMM50Q9Y512 469 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 MYH6P13533 1939 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 STX10O60499 249 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 PLEKHA8P1O95397 391 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 HIBADHP31937 336 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 MRPL12P52815 198 aaKnown RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 NONOQ15233 471 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ALDH8A1Q9H2A2 487 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 SLC39A2Q9NP94 309 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ERCC5P28715 1186 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 USP31Q70CQ4 1352 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 HLA-DOAP06340 250 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 KIAA0753Q2KHM9 967 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC65Q8IXS2 484 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 MFAP3LO75121 409 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 MMP1P03956 469 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 CCT5P48643 541 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 DNM2P50570 870 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 E4F1Q66K89 784 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ATG9AQ7Z3C6 839 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 ZNF622Q969S3 477 aaKnown RBP eCLIP5.14□□□□□ -1.592e-6■■□□□ 14.2
VPS13C-201ENST00000249837 PRM3Q9NNZ6 103 aa5.14□□□□□ -1.59
VPS13C-201ENST00000249837 VIMP08670 466 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 GUCY1A2P33402 732 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 FMR1Q06787 632 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 LRRC41Q15345 812 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CTIFO43310 598 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 GOLGA8HP0CJ92 632 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 DDB1Q16531 1140 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 TMOD2Q9NZR1 351 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 IFT20Q8IY31 132 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC151A5D8V7 595 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 H7C1D1 291 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 ADCY7P51828 1080 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 FOXP1Q9H334 677 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 KCNK3O14649 394 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 LIFRP42702 1097 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 IFI16Q16666 785 aaKnown RBP5.13□□□□□ -1.59
VPS13C-201ENST00000249837 TPTE2Q6XPS3 522 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 USP49Q70CQ1 688 aa5.13□□□□□ -1.59
VPS13C-201ENST00000249837 CUL5Q93034 780 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms