RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MYH13Q9UKX3 1938 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 NDUFB10O96000 172 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 CMTR1Q8N1G2 835 aaKnown RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 PFKFB2O60825 505 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 DEXIO95424 95 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCNA1P78396 465 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 SGMS1Q86VZ5 419 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
TNFAIP3-201ENST00000237289 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 ZNF76P36508 570 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 ANTXR2P58335 489 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 USH1GQ495M9 461 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 PHKBQ93100 1093 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 SLF1Q9BQI6 1058 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 ARFGEF1Q9Y6D6 1849 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 FOXP2O15409 715 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 KIF22Q14807 665 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 SMARCC2Q8TAQ2 1214 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 CLMNQ96JQ2 1002 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 LLPHQ9BRT6 129 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 C6orf50Q9HD87 102 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 COL4A5P29400 1685 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.84□□□□□ -0.358e-12■■■■□ 20.4
TNFAIP3-201ENST00000237289 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
TNFAIP3-201ENST00000237289 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.35
TNFAIP3-201ENST00000237289 PPIL2Q13356 520 aa12.83□□□□□ -0.35
TNFAIP3-201ENST00000237289 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 ALAS1P13196 640 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 GNA11P29992 359 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 FBXO11Q86XK2 927 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 POTECB2RU33 542 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 COG2Q14746 738 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
TNFAIP3-201ENST00000237289 CALML3P27482 149 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 ROBO3Q96MS0 1386 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 IRF6O14896 467 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 RCAN1P53805 252 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 AMNQ9BXJ7 453 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 B4DLN1 442 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 FGRP09769 529 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 GRM4Q14833 912 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 NSMFQ6X4W1 530 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 PARK7Q99497 189 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 WDR18Q9BV38 432 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 MRPL11Q9Y3B7 192 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-201ENST00000237289 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 UNCXA6NJT0 531 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 FDX1P10109 184 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 SCRN1Q12765 414 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 NBR1Q14596 966 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 GLT8D2Q9H1C3 349 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 ARHGEF6Q15052 776 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 ALDH8A1Q9H2A2 487 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 PCDHA1Q9Y5I3 950 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 PDHBP11177 359 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 INHBEP58166 350 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 NOGQ13253 232 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 INTS4Q96HW7 963 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 WNK4Q96J92 1243 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
TNFAIP3-201ENST00000237289 APLP1P51693 650 aa12.8□□□□□ -0.36
TNFAIP3-201ENST00000237289 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
TNFAIP3-201ENST00000237289 GBP4Q96PP9 640 aa12.8□□□□□ -0.36
TNFAIP3-201ENST00000237289 ZFYVE28Q9HCC9 887 aa12.8□□□□□ -0.36
TNFAIP3-201ENST00000237289 PIGSQ96S52 555 aa12.8□□□□□ -0.36
TNFAIP3-201ENST00000237289 KIF3CO14782 793 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms