RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PDE11AQ9HCR9 933 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 GOLGA8KD6RF30 607 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 CD19P15391 556 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 GCNT3O95395 438 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 PPP4R1Q8TF05 950 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 MYO1AQ9UBC5 1043 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 PARP2Q9UGN5 583 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 MYLK4Q86YV6 388 aaPredicted RBP12.19□□□□□ -0.46
MSH6-201ENST00000234420 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 LBHD1Q9BQE6 289 aaPredicted RBP12.19□□□□□ -0.46
MSH6-201ENST00000234420 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 FAM133BQ5BKY9 247 aaKnown RBP12.19□□□□□ -0.46
MSH6-201ENST00000234420 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 TGFBRAP1Q8WUH2 860 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 VPS37BQ9H9H4 285 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 INTUQ9ULD6 942 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
MSH6-201ENST00000234420 KRT14P02533 472 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 TNNI1P19237 187 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 KCNQ4P56696 695 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 ICE2Q659A1 982 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
MSH6-201ENST00000234420 TRIM55Q9BYV6 548 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
MSH6-201ENST00000234420 KCTD16Q68DU8 428 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 CTNND2Q9UQB3 1225 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 RCN2Q14257 317 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 SCYL1Q96KG9 808 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 RPGRIP1Q96KN7 1286 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 ALAS1P13196 640 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 GNPTABQ3T906 1256 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 JADE1Q6IE81 842 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
MSH6-201ENST00000234420 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 LRGUKQ96M69 825 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
MSH6-201ENST00000234420 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
MSH6-201ENST00000234420 ZNF174Q15697 407 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 ARHGEF35A5YM69 484 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 GTF2IP78347 998 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 DAB2P98082 770 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 PDE4DQ08499 809 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 KRT81Q14533 505 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 ANKRD20A4Q4UJ75 823 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 ANKRD20A8PQ5CZ79 823 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 ANKRD20A2Q5SQ80 823 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 ANKRD20A1Q5TYW2 823 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 HAUS2Q9NVX0 235 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 EIF4E1BA6NMX2 242 aaKnown RBP12.18□□□□□ -0.46
MSH6-201ENST00000234420 NEK2P51955 445 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 MYL5Q02045 173 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 UBL4BQ8N7F7 174 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.18□□□□□ -0.46
MSH6-201ENST00000234420 TEKT1Q969V4 418 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 DRC3Q9H069 523 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 BAG5Q9UL15 447 aa12.18□□□□□ -0.46
MSH6-201ENST00000234420 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 EVI5LQ96CN4 794 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 SH2D4AQ9H788 454 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 MAP3K7O43318 606 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 DNAJC6O75061 913 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 MMEL1Q495T6 779 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 LGSNQ5TDP6 509 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.17□□□□□ -0.46
MSH6-201ENST00000234420 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
MSH6-201ENST00000234420 KDM1AO60341 852 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
MSH6-201ENST00000234420 Q6ZUG5 572 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 TRIM60Q495X7 471 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 UHMK1Q8TAS1 419 aaKnown RBP12.17□□□□□ -0.46
MSH6-201ENST00000234420 SMYD2Q9NRG4 433 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 DDX28Q9NUL7 540 aaKnown RBP12.17□□□□□ -0.46
MSH6-201ENST00000234420 ANKRD30BQ9BXX2 1392 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 BMP2KLQ5H9B9 411 aa12.17□□□□□ -0.46
MSH6-201ENST00000234420 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 SEC24BO95487 1268 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 UQCRFS1P1P0C7P4 283 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 MRPS15P82914 257 aaKnown RBP12.16□□□□□ -0.46
MSH6-201ENST00000234420 LMNB2Q03252 620 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 KIFAP3Q92845 792 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 NOC4LQ9BVI4 516 aaKnown RBP12.16□□□□□ -0.46
MSH6-201ENST00000234420 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 HACD3Q9P035 362 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms