RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZBTB38Q8NAP3 1195 aaPredicted RBP19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 ANKRD20A12PQ8NF67 263 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 PLA2G12BQ9BX93 195 aa19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 SRPRBQ9Y5M8 271 aaKnown RBP19.9■□□□□ 0.78
CDKN1B-201ENST00000228872 ATP1A1P05023 1023 aaKnown RBP19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 MAP2K2P36507 400 aa19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 USP8P40818 1118 aa19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 PTF1AQ7RTS3 328 aa19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 NLRP10Q86W26 655 aa19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 DIS3L2Q8IYB7 885 aaKnown RBP19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 NUP88Q99567 741 aaPredicted RBP19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 PCDHB6Q9Y5E3 794 aa19.89■□□□□ 0.78
CDKN1B-201ENST00000228872 GRIN2DO15399 1336 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 STK36Q9NRP7 1315 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 MMP1P03956 469 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 CCNI2Q6ZMN8 369 aaPredicted RBP19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 SMYD4Q8IYR2 804 aaPredicted RBP19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 BCAS4Q8TDM0 211 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 MYL10Q9BUA6 226 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 CAPS2Q9BXY5 557 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 CSRNP2Q9H175 543 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 SAR1BQ9Y6B6 198 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 CNTNAP4Q9C0A0 1308 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 PPP1R3GB7ZBB8 358 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 EIF3HO15372 352 aaKnown RBP eCLIP19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 SRGAP2O75044 1071 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 INPP5BP32019 993 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 SSRP1Q08945 709 aaKnown RBP19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 KRT31Q15323 416 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 RILPL1Q5EBL4 403 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 TBC1D2BQ9UPU7 963 aa19.89■□□□□ 0.77
CDKN1B-201ENST00000228872 GOLGA6BA6NDN3 693 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 AFMP43652 599 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 SAFBQ15424 915 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 PAPD7Q5XG87 772 aaKnown RBP19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 ZNF34Q8IZ26 560 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 CNPY4Q8N129 248 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 LINC00116Q8NCU8 138 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 EPN1Q9Y6I3 576 aaPredicted RBP19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 SHTN1A0MZ66 631 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 N4BP3O15049 544 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 NDUFA10O95299 355 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 CASP1P29466 404 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 KRT9P35527 623 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 CKAP4Q07065 602 aaKnown RBP19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 TRIM14Q14142 442 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 NFXL1Q6ZNB6 911 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 CAPZA3Q96KX2 299 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 CHP1Q99653 195 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 RABEP2Q9H5N1 569 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 LIMA1Q9UHB6 759 aaKnown RBP19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 KCNJ14Q9UNX9 436 aa19.88■□□□□ 0.77
CDKN1B-201ENST00000228872 A0A087X0B3 334 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 FMNL1O95466 1100 aaPredicted RBP19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 FAM182BQ5T319 152 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 HAUS4Q9H6D7 363 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 CCDC172P0C7W6 258 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 GUCY1A2P33402 732 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 GNGT1P63211 74 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 DPYDQ12882 1025 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 GBP6Q6ZN66 633 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 SH3RF1Q7Z6J0 888 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 FAM89AQ96GI7 184 aa19.87■□□□□ 0.77
CDKN1B-201ENST00000228872 B4E1Z4 1266 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 CAMTA2O94983 1202 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 ADORA1P30542 326 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 SCARF1Q14162 830 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 IGDCC4Q8TDY8 1250 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 PAGE5Q96GU1 130 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 TMEM87BQ96K49 555 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 PUS3Q9BZE2 481 aaKnown RBP19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 LY9Q9HBG7 655 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 CTNND2Q9UQB3 1225 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 CCDC196A0A1B0GTZ2 297 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 RC3H1Q5TC82 1133 aaKnown RBP19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 WASF1Q92558 559 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 VPS16Q9H269 839 aa19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 FOXP1Q9H334 677 aaPredicted RBP19.86■□□□□ 0.77
CDKN1B-201ENST00000228872 LAMB2P55268 1798 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 LRRC10BA6NIK2 292 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 COBLO75128 1261 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 ZAP70P43403 619 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 COPB1P53618 953 aaKnown RBP19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 CCDC57Q2TAC2 916 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 PRPF38AQ8NAV1 312 aaKnown RBP19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 AENQ8WTP8 325 aaKnown RBP19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 MYH8P13535 1937 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 CIAO1O76071 339 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 SGMS1Q86VZ5 419 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 CCDC85AQ96PX6 553 aaPredicted RBP19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 SH3GL2Q99962 352 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 TAB2Q9NYJ8 693 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 CEP83Q9Y592 693 aa19.85■□□□□ 0.77
CDKN1B-201ENST00000228872 GPTP24298 496 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 NR5A1Q13285 461 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 GSDMAQ96QA5 445 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 FAM184BQ9ULE4 1060 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms