RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ABCB5Q2M3G0 1257 aa22.66■■□□□ 1.22
TNFRSF1A-201ENST00000162749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.66■■□□□ 1.222e-7■■■□□ 17.4
TNFRSF1A-201ENST00000162749 SEPT2Q15019 361 aa22.66■■□□□ 1.22
TNFRSF1A-201ENST00000162749 CNOT7Q9UIV1 285 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1A-201ENST00000162749 EEF2P13639 858 aaKnown RBP22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 LIG1P18858 919 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SMARCA1P28370 1054 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 JAG1P78504 1218 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 STK38Q15208 465 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 ASPRV1Q53RT3 343 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 RBM26Q5T8P6 1007 aaKnown RBP22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 GPKOWQ92917 476 aaPredicted RBP eCLIP22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SYT17Q9BSW7 474 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 NYAP2Q9P242 653 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 FRMPD2Q68DX3 1309 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 LMNB1P20700 586 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 KRT2P35908 639 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 ME1P48163 572 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 CCDC173Q0VFZ6 552 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SAMD7Q7Z3H4 446 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 MKL1Q969V6 931 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 PGAP2Q9UHJ9 254 aa22.65■■□□□ 1.22
TNFRSF1A-201ENST00000162749 CCDC183Q5T5S1 534 aa22.64■■□□□ 1.21
TNFRSF1A-201ENST00000162749 SIAH1Q8IUQ4 282 aa22.64■■□□□ 1.21
TNFRSF1A-201ENST00000162749 BICD2Q8TD16 824 aa22.64■■□□□ 1.21
TNFRSF1A-201ENST00000162749 KCNG4Q8TDN1 519 aa22.64■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ATAD5Q96QE3 1844 aa22.64■■□□□ 1.21
TNFRSF1A-201ENST00000162749 GH2P01242 217 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TOB1P50616 345 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ICA1Q05084 483 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 SH3GLB2Q9NR46 395 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 PCDHA7Q9UN72 937 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 SPTLC2O15270 562 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ZNF543Q08ER8 600 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TYW1BQ6NUM6 668 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 RIOX1Q9H6W3 641 aa22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 SCAF8Q9UPN6 1271 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1A-201ENST00000162749 SLC39A14Q15043 492 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TBC1D10BQ4KMP7 808 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 RILPL1Q5EBL4 403 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 WWC2Q6AWC2 1192 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TNFRSF25Q93038 417 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 UBA5Q9GZZ9 404 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 BRMS1Q9HCU9 246 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TBC1D12O60347 775 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 NLRP5P59047 1200 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 PTPAQ15257 358 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 BARHL2Q9NY43 387 aa22.62■■□□□ 1.21
TNFRSF1A-201ENST00000162749 RASA3Q14644 834 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 EARS2Q5JPH6 523 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 HOMER1Q86YM7 354 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 CABP5Q9NP86 173 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 POLR2AP24928 1970 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 FAM205CA6NFA0 338 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TNNI2P48788 182 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 GPATCH4Q5T3I0 446 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ADALQ6DHV7 355 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 HEATR3Q7Z4Q2 680 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 RRP36Q96EU6 259 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 DACT1Q9NYF0 836 aa22.61■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ASTN2O75129 1339 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 NR1I2O75469 434 aa22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TNFAIP1Q13829 316 aa22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 MIGA2Q7L4E1 593 aa22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 PIGSQ96S52 555 aa22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 VAT1LQ9HCJ6 419 aa22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 GPCPD1Q9NPB8 672 aa22.6■■□□□ 1.21
TNFRSF1A-201ENST00000162749 STXBP3O00186 592 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ADAMTS3O15072 1205 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 KIF4BQ2VIQ3 1234 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 SEC63Q9UGP8 760 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 CALML3P27482 149 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 MAP3K10Q02779 954 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 KCTD1Q719H9 257 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 CCAR1Q8IX12 1150 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 GPC2Q8N158 579 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 CCDC148Q8NFR7 591 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 ANP32BQ92688 251 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TRIM44Q96DX7 344 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 TEPSINQ96N21 525 aa22.59■■□□□ 1.21
TNFRSF1A-201ENST00000162749 MARCKSP29966 332 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1A-201ENST00000162749 NOM1Q5C9Z4 860 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1A-201ENST00000162749 GOLPH3LQ9H4A5 285 aa22.58■■□□□ 1.21
TNFRSF1A-201ENST00000162749 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1A-201ENST00000162749 HACL1Q9UJ83 578 aa22.58■■□□□ 1.21
TNFRSF1A-201ENST00000162749 PCDHB6Q9Y5E3 794 aa22.58■■□□□ 1.21
TNFRSF1A-201ENST00000162749 PPP6R2O75170 966 aa22.58■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CCDC96Q2M329 555 aa22.58■■□□□ 1.2
TNFRSF1A-201ENST00000162749 AXDND1Q5T1B0 1012 aaPredicted RBP22.58■■□□□ 1.2
TNFRSF1A-201ENST00000162749 TTBK2Q6IQ55 1244 aa22.58■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.58■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PCDHA4Q9UN74 947 aa22.58■■□□□ 1.2
TNFRSF1A-201ENST00000162749 A0A1W2PQ27 194 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 A0A1W2PQ64 194 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 A0A1W2PQD8 194 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ESPNB1AK53 854 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 YBX3P16989 372 aaKnown RBP eCLIP22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 BLIDQ8IZY5 108 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms