RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Pbxip1Q3TVI8 727 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Parp3Q3ULW8 533 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Pls1Q3V0K9 630 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Tpp2Q64514 1262 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Cnnm4Q69ZF7 771 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Palm2Q8BR92 376 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Zmynd15Q8C0R7 736 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ufl1Q8CCJ3 793 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Lmo7E9PYF4 1699 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ctnna3Q65CL1 895 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Rab3gap1Q80UJ7 981 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ppp2r2cQ8BG02 447 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 4932411N23RikQ8C0S0 470 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Abcc4E9Q236 1325 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ncapd2Q8K2Z4 1392 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Kif23E9Q5G3 953 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 MafgO54790 162 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Wdr36Q3TAQ9 899 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Saal1Q9D2C2 474 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ccdc182Q9D9C6 152 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ube3bQ9ES34 1070 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Znf711A2ANX9 761 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ubn1Q4G0F8 1135 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Tshz1Q5DTH5 1084 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Elf1Q60775 612 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Gbp4A4UUI3 631 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Pde9aO70628 534 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Tsc22d1P62500 1077 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Cct6aP80317 531 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Adcy8P97490 1249 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Prdm1Q60636 856 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Zfp418Q8BFS8 652 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Taf12Q8VE65 161 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ccdc130Q9D516 385 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Klhl40Q9D783 621 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Dnajb7Q9QYI8 312 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Mmp8O70138 465 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Iqsec3Q3TES0 1195 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Vps54Q5SPW0 977 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Gpbp1Q6NXH3 473 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Rgs3Q9DC04 966 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 TxlngQ8BHN1 524 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Trim71Q1PSW8 855 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Vil1Q62468 827 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Prr18Q6PAN7 307 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Scyl1Q9EQC5 806 aaKnown RBP8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Peg3Q3URU2 1571 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Akap5D3YVF0 745 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 C1qbpO35658 278 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Lmntd2Q0VET5 664 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Slc8a3S4R2P9 928 aa8.94□□□□□ -0.98
Spen-201ENSMUST00000078886 Ubn2Q80WC1 1314 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Otud7bB2RUR8 840 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Parp1P11103 1013 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Cyth2P63034 400 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Patl1Q3TC46 770 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Wdr70Q3TWF6 657 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Cdc26Q99JP4 85 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Efcab2Q9CQ46 164 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Sorbs3Q9R1Z8 733 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Gcc2Q8CHG3 1679 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 MthfslL7N466 203 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Tbc1d1Q60949 1255 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Tceal1Q921P9 165 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Plekhg2Q6KAU7 1340 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Tcp1P11983 556 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Terf1P70371 421 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Herc4Q6PAV2 1057 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Mrps22Q9CXW2 359 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Gm14025A2AP89 1413 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Ankrd50F7BE84 1390 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Stk36Q69ZM6 1316 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Kifc2O08672 792 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Samsn1P57725 372 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Nfil3O08750 462 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Exoc5Q3TPX4 708 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Tmtc2Q56A06 836 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Trim21Q62191 470 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Tpcn2Q8BWC0 731 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Pspc1Q8R326 523 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Tut1Q8R3F9 869 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Pdzd4Q9QY39 772 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 NntQ61941 1086 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Rbm12b2Q66JV4 834 aaKnown RBP8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Camsap3Q80VC9 1252 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Cdc23Q8BGZ4 597 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 D130040H23RikQ8BII3 405 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 4933409G03RikQ8C5U0 320 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Kcnk13Q8R1P5 405 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Gm10488Q4KL05 212 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Gm14819Q62478 212 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Gm30191A0A0U1RNT7 187 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 AdkP55264 361 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Lyve1Q8BHC0 318 aa8.93□□□□□ -0.98
Spen-201ENSMUST00000078886 Myo1eE9Q634 1107 aa8.92□□□□□ -0.98
Spen-201ENSMUST00000078886 Myo1fP70248 1099 aa8.92□□□□□ -0.98
Spen-201ENSMUST00000078886 Q9CR55 154 aa8.92□□□□□ -0.98
Spen-201ENSMUST00000078886 Ccdc189Q6NZQ0 333 aa8.92□□□□□ -0.98
Spen-201ENSMUST00000078886 Mrps26Q80ZS3 200 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms