RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	NRT1	Q08485	598 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	YLR053C	Q12026	108 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	VPS54	Q12071	889 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	EMP46	Q12396	444 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	HEM1	P09950	548 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	RPL4A	P10664	362 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	PWP1	P21304	576 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	LRE1	P25579	583 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	YKL107W	P34251	309 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	KES1	P35844	434 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	OTU2	P38747	307 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	DPH1	P40487	425 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	PRK1	P40494	810 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	SKP2	P42843	763 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	VTC4	P47075	721 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	RPL4B	P49626	362 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	KCS1	Q12494	1050 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	NOT5	Q12514	560 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	ATP12	P22135	325 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	RPC19	P28000	142 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	GPI10	P30777	616 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	MLS1	P30952	554 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	HEL1	P36113	551 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	ABZ1	P37254	787 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	FRT2	P39734	528 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	ZAP1	P47043	880 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	MRX6	P48564	524 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	PAN2	P53010	1115 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	COP1	P53622	1201 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	IST1	P53843	298 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	YPL062W	Q02781	134 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	MUB1	Q03162	620 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	SKY1	Q03656	742 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	ECM38	Q05902	660 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	GNT1	Q12096	491 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	ERP4	Q12450	207 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	EFG1	Q3E705	233 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	GAL80	P04387	435 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	RAD3	P06839	778 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	KGD2	P19262	463 aa	Predicted RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	AMD2	P22580	549 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	TOK1	P40310	691 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	SEC27	P41811	889 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	AZR1	P50080	613 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	MIG2	P53035	382 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	PBP1	P53297	722 aa	Known RBP	4.08	□□□□□ -1.76
CHL1	YPL008W	FMN1	Q03778	218 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	AIM32	Q04689	311 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	ATG33	Q06485	197 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	YET3	Q07451	203 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	GYP1	Q08484	637 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	YDR056C	Q12025	205 aa		4.08	□□□□□ -1.76
CHL1	YPL008W	MOT1	P32333	1867 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	HAP2	P06774	265 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	HMG1	P12683	1054 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	RSA4	P25382	515 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	AAD3	P25612	363 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	YCR015C	P25616	317 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	HRR25	P29295	494 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	NDI1	P32340	513 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	SMI1	P32566	505 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	ALG3	P38179	458 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	HSL7	P38274	827 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	RFC3	P38629	340 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	DLD3	P39976	496 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	ESL1	P40456	1118 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	LEM3	P42838	414 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	YJL107C	P42947	387 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	CAF16	P43569	289 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	DUG1	P43616	481 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	YNL144C	P53907	740 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	SNP1	Q00916	300 aa	Predicted RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	MUK1	Q02866	612 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	RLI1	Q03195	608 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	HED1	Q03937	162 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	TPK1	P06244	397 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	CDC4	P07834	779 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
CHL1	YPL008W	SIN4	P32259	974 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	VPH1	P32563	840 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	BEM3	P32873	1128 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	SWH1	P35845	1188 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	MRPL7	P36519	292 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	VRP1	P37370	817 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	BIT2	P38346	545 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	YHL026C	P38740	315 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	CCT7	P42943	550 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	QRI7	P43122	407 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	FAR3	P46671	204 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	POL31	P46957	487 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	TAH11	P47112	604 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	GCV2	P49095	1034 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	TEL2	P53038	688 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	ESF2	P53743	316 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	STP1	Q00947	519 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	UBP2	Q01476	1272 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	ENT5	Q03769	411 aa	Known RBP	4.07	□□□□□ -1.76
CHL1	YPL008W	HFD1	Q04458	532 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	YLR177W	Q06251	628 aa		4.07	□□□□□ -1.76
CHL1	YPL008W	RSC2	Q06488	889 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms