RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NT5C2P49902 561 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 IQCA1Q86XH1 822 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 MKL1Q969V6 931 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 CHMP4CQ96CF2 233 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 ZSCAN10Q96SZ4 725 aaPredicted RBP15.55■□□□□ 0.08
GTF3A-209ENST00000640289 TMEM47Q9BQJ4 181 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 SH2D4AQ9H788 454 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 MCCP23508 829 aa15.54■□□□□ 0.08
GTF3A-209ENST00000640289 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
GTF3A-209ENST00000640289 RASGRP2Q7LDG7 609 aa15.54■□□□□ 0.08
GTF3A-209ENST00000640289 ENAHQ8N8S7 591 aaPredicted RBP15.54■□□□□ 0.08
GTF3A-209ENST00000640289 NEK1Q96PY6 1258 aa15.54■□□□□ 0.08
GTF3A-209ENST00000640289 UBAC1Q9BSL1 405 aa15.54■□□□□ 0.08
GTF3A-209ENST00000640289 GOPCQ9HD26 462 aa15.54■□□□□ 0.08
GTF3A-209ENST00000640289 F5H6K3 240 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 PRC1O43663 620 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 CYP2C8P10632 490 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 CPA1P15085 419 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 KLRC3Q07444 240 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 KRT32Q14532 448 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 SEC23AQ15436 765 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 TAF1CQ15572 869 aaPredicted RBP15.53■□□□□ 0.08
GTF3A-209ENST00000640289 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 DGKHQ86XP1 1220 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
GTF3A-209ENST00000640289 LRRC2Q9BYS8 371 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 R3HDMLQ9H3Y0 253 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 RPAP3Q9H6T3 665 aaPredicted RBP15.53■□□□□ 0.08
GTF3A-209ENST00000640289 SENP2Q9HC62 589 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 TSKSQ9UJT2 592 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 MTMR7Q9Y216 660 aa15.53■□□□□ 0.08
GTF3A-209ENST00000640289 LOC285556D6RIA3 1793 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 IFIT3O14879 490 aaKnown RBP15.52■□□□□ 0.08
GTF3A-209ENST00000640289 NDUFB10O96000 172 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 ALDH1A1P00352 501 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 TOP1P11387 765 aaKnown RBP15.52■□□□□ 0.08
GTF3A-209ENST00000640289 MCM5P33992 734 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 CCDC178Q5BJE1 867 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 SLFN13Q68D06 897 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 LPAR1Q92633 364 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 TCEANC2Q96MN5 208 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 TTC14Q96N46 770 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 NUP88Q99567 741 aaPredicted RBP15.52■□□□□ 0.08
GTF3A-209ENST00000640289 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.08
GTF3A-209ENST00000640289 GPHNQ9NQX3 736 aaPredicted RBP15.52■□□□□ 0.08
GTF3A-209ENST00000640289 PTPRFP10586 1907 aa15.52■□□□□ 0.07
GTF3A-209ENST00000640289 EIF5BO60841 1220 aaKnown RBP15.51■□□□□ 0.07
GTF3A-209ENST00000640289 HSPA1AP0DMV8 641 aaKnown RBP15.51■□□□□ 0.07
GTF3A-209ENST00000640289 HSPA1BP0DMV9 641 aaKnown RBP15.51■□□□□ 0.07
GTF3A-209ENST00000640289 HOXA7P31268 230 aaPredicted RBP15.51■□□□□ 0.07
GTF3A-209ENST00000640289 CRHR2Q13324 411 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 TMEM67Q5HYA8 995 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 FAM83BQ5T0W9 1011 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 CATSPERGQ6ZRH7 1159 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 GMCL1P1Q8NEA9 526 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 IGDCC4Q8TDY8 1250 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 ANKS1AQ92625 1134 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 ASCC2Q9H1I8 757 aaPredicted RBP15.51■□□□□ 0.07
GTF3A-209ENST00000640289 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
GTF3A-209ENST00000640289 SYNPO2Q9UMS6 1093 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 SLC45A1Q9Y2W3 748 aa15.51■□□□□ 0.07
GTF3A-209ENST00000640289 ERICH2A1L162 156 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L15C9J2P7 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L13C9JLJ4 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L11C9JVI0 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L18D6R9N7 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L22D6RA61 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L17D6RBQ6 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L19D6RCP7 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L20D6RJB6 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 WDR46O15213 610 aaKnown RBP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 CA12O43570 354 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 IRX3P78415 501 aaPredicted RBP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 USP17L24Q0WX57 530 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 WTAPQ15007 396 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 IFIT1BQ5T764 474 aaKnown RBP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 PARK7Q99497 189 aaKnown RBP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 P2RX7Q99572 595 aaKnown RBP15.5■□□□□ 0.07
GTF3A-209ENST00000640289 TANGO6Q9C0B7 1094 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 KAT14Q9H8E8 782 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 ZFYVE28Q9HCC9 887 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 SAGE1Q9NXZ1 904 aa15.5■□□□□ 0.07
GTF3A-209ENST00000640289 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
GTF3A-209ENST00000640289 FOXN1O15353 648 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
GTF3A-209ENST00000640289 OSBPP22059 807 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 SLC1A4P43007 532 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 SART3Q15020 963 aaKnown RBP15.49■□□□□ 0.07
GTF3A-209ENST00000640289 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
GTF3A-209ENST00000640289 DHX32Q7L7V1 743 aaKnown RBP15.49■□□□□ 0.07
GTF3A-209ENST00000640289 PNMA1Q8ND90 353 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 CFHR5Q9BXR6 569 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 LY9Q9HBG7 655 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 FBXO28Q9NVF7 368 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
GTF3A-209ENST00000640289 ADGRA2Q96PE1 1338 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms