RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 BUB1O43683 1085 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 TBC1D8O95759 1140 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 AMFRQ9UKV5 643 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 I3L4J1 428 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 CRCPO75575 148 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 BCRP11274 1271 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 CMA1P23946 247 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 PDE11AQ9HCR9 933 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 KCNK3O14649 394 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 ARHGAP44Q17R89 818 aa20.46■□□□□ 0.87
SCARB2-213ENST00000638680 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
SCARB2-213ENST00000638680 DDX39AO00148 427 aaKnown RBP20.45■□□□□ 0.86
SCARB2-213ENST00000638680 VPS37BQ9H9H4 285 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 PARP2Q9UGN5 583 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 STX2P32856 288 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 LIG3P49916 1009 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.45■□□□□ 0.86
SCARB2-213ENST00000638680 STK24Q9Y6E0 443 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 TRPC3Q13507 836 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 GOLGA5Q8TBA6 731 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 SH3TC1Q8TE82 1336 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 PAXIP1Q6ZW49 1069 aaPredicted RBP20.45■□□□□ 0.86
SCARB2-213ENST00000638680 ZNF518AQ6AHZ1 1483 aa20.45■□□□□ 0.86
SCARB2-213ENST00000638680 CASQ2O14958 399 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-213ENST00000638680 RNF40O75150 1001 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 FAM71BQ8TC56 605 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 BCAS4Q8TDM0 211 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 CCT6BQ92526 530 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 GLT8D2Q9H1C3 349 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 TXNDC9O14530 226 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 STRN3Q13033 797 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 PSMD6Q15008 389 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
SCARB2-213ENST00000638680 CLIC6Q96NY7 704 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 FAM47AQ5JRC9 791 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 CLIC4Q9Y696 253 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 KRIT1O00522 736 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 SEC31AO94979 1220 aaKnown RBP20.44■□□□□ 0.86
SCARB2-213ENST00000638680 ZWINTO95229 277 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
SCARB2-213ENST00000638680 KIAA0232Q92628 1395 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 DCUN1D2Q6PH85 259 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 CEP120Q8N960 986 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 FAM114A2Q9NRY5 505 aa20.44■□□□□ 0.86
SCARB2-213ENST00000638680 SHANK2Q9UPX8 1470 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
SCARB2-213ENST00000638680 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 UFL1O94874 794 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 A1BGP04217 495 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 CA8P35219 290 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 PTPROQ16827 1216 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 SSH3Q8TE77 659 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 CDC25BP30305 580 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 ZNF654Q8IZM8 581 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 LZTS2Q9BRK4 669 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 GNA14O95837 355 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 PPARAQ07869 468 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 ANKRD20A3Q5VUR7 823 aa20.43■□□□□ 0.86
SCARB2-213ENST00000638680 BIN2Q9UBW5 565 aaPredicted RBP20.43■□□□□ 0.86
SCARB2-213ENST00000638680 DMTNQ08495 405 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 HINFPQ9BQA5 517 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 MED4Q9NPJ6 270 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 PHLDB2Q86SQ0 1253 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 ZMYM6O95789 1325 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 ABCB4P21439 1286 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 TTC19Q6DKK2 380 aaPredicted RBP20.42■□□□□ 0.86
SCARB2-213ENST00000638680 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
SCARB2-213ENST00000638680 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
SCARB2-213ENST00000638680 EYA3Q99504 573 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 TFCP2L1Q9NZI6 479 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 DNM2P50570 870 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
SCARB2-213ENST00000638680 HAUS4Q9H6D7 363 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 SH2D4AQ9H788 454 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 LGSNQ5TDP6 509 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 TRIML1Q8N9V2 468 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 EPSTI1Q96J88 318 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 USH1GQ495M9 461 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 TDRD7Q8NHU6 1098 aaKnown RBP20.41■□□□□ 0.86
SCARB2-213ENST00000638680 DPH5Q9H2P9 285 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 ADD1P35611 737 aaKnown RBP20.41■□□□□ 0.86
SCARB2-213ENST00000638680 MAIP1Q8WWC4 291 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 ADCY9O60503 1353 aa20.41■□□□□ 0.86
SCARB2-213ENST00000638680 STK10O94804 968 aaKnown RBP20.4■□□□□ 0.86
SCARB2-213ENST00000638680 RASSF2P50749 326 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 TFAP4Q01664 338 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 PPP2R5DQ14738 602 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 SPATS2Q86XZ4 545 aaKnown RBP20.4■□□□□ 0.86
SCARB2-213ENST00000638680 REXO1Q8N1G1 1221 aaKnown RBP20.4■□□□□ 0.86
SCARB2-213ENST00000638680 PCDHB13Q9Y5F0 798 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 DAPK3O43293 454 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 KLHL14Q9P2G3 628 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 GOLGA8FQ08AF8 430 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 GOLGA8DPQ0D2H9 430 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 MUM1Q2TAK8 710 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms