RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 RTEL1Q9NZ71 1219 aa25.08■■□□□ 1.6
SCARB2-212ENST00000638663 CLIC4Q9Y696 253 aa25.08■■□□□ 1.6
SCARB2-212ENST00000638663 BAZ2BQ9UIF8 2168 aaKnown RBP25.07■■□□□ 1.6
SCARB2-212ENST00000638663 GOLGA8HP0CJ92 632 aa25.07■■□□□ 1.6
SCARB2-212ENST00000638663 PRELPP51888 382 aa25.07■■□□□ 1.6
SCARB2-212ENST00000638663 FOXP4Q8IVH2 680 aaPredicted RBP25.07■■□□□ 1.6
SCARB2-212ENST00000638663 CCDC17Q96LX7 622 aa25.07■■□□□ 1.6
SCARB2-212ENST00000638663 PALM3A6NDB9 673 aaPredicted RBP25.06■■□□□ 1.6
SCARB2-212ENST00000638663 SPDYE2Q495Y8 402 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 GAS2L3Q86XJ1 694 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 CLIP2Q9UDT6 1046 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 SHTN1A0MZ66 631 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 FSD2A1L4K1 749 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 ZNF445P59923 1031 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 CERKLQ49MI3 558 aaPredicted RBP25.06■■□□□ 1.6
SCARB2-212ENST00000638663 LRRC47Q8N1G4 583 aaKnown RBP25.06■■□□□ 1.6
SCARB2-212ENST00000638663 MTMR14Q8NCE2 650 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 CSRNP1Q96S65 589 aa25.06■■□□□ 1.6
SCARB2-212ENST00000638663 TTLL1O95922 423 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 PARP1P09874 1014 aaKnown RBP25.05■■□□□ 1.6
SCARB2-212ENST00000638663 SCG2P13521 617 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 SLC35G1Q2M3R5 365 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 USP17L2Q6R6M4 530 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 NOSTRINQ8IVI9 506 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 VEZTQ9HBM0 779 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 POLR3EQ9NVU0 708 aa25.05■■□□□ 1.6
SCARB2-212ENST00000638663 SYCE3A1L190 88 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 PFKFB3Q16875 520 aaPredicted RBP25.04■■□□□ 1.6
SCARB2-212ENST00000638663 BICD2Q8TD16 824 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 OXER1Q8TDS5 423 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 PHF20Q9BVI0 1012 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 FOXP1Q9H334 677 aaPredicted RBP25.04■■□□□ 1.6
SCARB2-212ENST00000638663 COL2A1P02458 1487 aaPredicted RBP25.04■■□□□ 1.6
SCARB2-212ENST00000638663 USP17L5A8MUK1 530 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 KLRF2D3W0D1 207 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 VEGFAP15692 232 aaPredicted RBP25.04■■□□□ 1.6
SCARB2-212ENST00000638663 LIG1P18858 919 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 NR5A1Q13285 461 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 STK38Q15208 465 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 SHROOM1Q2M3G4 852 aaPredicted RBP25.04■■□□□ 1.6
SCARB2-212ENST00000638663 ANO1Q5XXA6 986 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 TATDN1Q6P1N9 297 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 LINC00301Q8NCQ3 95 aa25.04■■□□□ 1.6
SCARB2-212ENST00000638663 ARFGEF1Q9Y6D6 1849 aa25.03■■□□□ 1.6
SCARB2-212ENST00000638663 NASPP49321 788 aaPredicted RBP25.03■■□□□ 1.6
SCARB2-212ENST00000638663 ATP2B2Q01814 1243 aa25.03■■□□□ 1.6
SCARB2-212ENST00000638663 CCDC183Q5T5S1 534 aa25.03■■□□□ 1.6
SCARB2-212ENST00000638663 METTL16Q86W50 562 aaKnown RBP25.03■■□□□ 1.6
SCARB2-212ENST00000638663 FAM151AQ8WW52 585 aa25.03■■□□□ 1.6
SCARB2-212ENST00000638663 LZTS2Q9BRK4 669 aa25.03■■□□□ 1.6
SCARB2-212ENST00000638663 MYOZ2Q9NPC6 264 aa25.03■■□□□ 1.6
SCARB2-212ENST00000638663 CYTH3O43739 400 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 YEATS4O95619 227 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 ME1P48163 572 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 ZBED3Q96IU2 234 aaPredicted RBP25.02■■□□□ 1.6
SCARB2-212ENST00000638663 CPVLQ9H3G5 476 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 GREB1LQ9C091 1923 aaPredicted RBP25.02■■□□□ 1.6
SCARB2-212ENST00000638663 CNTNAP1P78357 1384 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 WNT10BO00744 389 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 PDHBP11177 359 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 NBPF9Q3BBW0 867 aa25.02■■□□□ 1.6
SCARB2-212ENST00000638663 MYO1BO43795 1136 aa25.01■■□□□ 1.59
SCARB2-212ENST00000638663 GJA3Q9Y6H8 435 aa25.01■■□□□ 1.59
SCARB2-212ENST00000638663 FZD9O00144 591 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 GDF11O95390 407 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 RPS12P25398 132 aaKnown RBP25■■□□□ 1.59
SCARB2-212ENST00000638663 KRT2P35908 639 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 SF3A1Q15459 793 aaKnown RBP25■■□□□ 1.59
SCARB2-212ENST00000638663 KCNG4Q8TDN1 519 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 SPTLC2O15270 562 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 RBM26Q5T8P6 1007 aaKnown RBP25■■□□□ 1.59
SCARB2-212ENST00000638663 FKBP1CQ5VVH2 108 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 FRMPD2Q68DX3 1309 aaPredicted RBP25■■□□□ 1.59
SCARB2-212ENST00000638663 GPKOWQ92917 476 aaPredicted RBP eCLIP25■■□□□ 1.59
SCARB2-212ENST00000638663 SPZ1Q9BXG8 430 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 FHDC1Q9C0D6 1143 aaPredicted RBP25■■□□□ 1.59
SCARB2-212ENST00000638663 ISY1Q9ULR0 285 aaKnown RBP25■■□□□ 1.59
SCARB2-212ENST00000638663 PCDHA7Q9UN72 937 aa25■■□□□ 1.59
SCARB2-212ENST00000638663 GMPSP49915 693 aaPredicted RBP24.99■■□□□ 1.59
SCARB2-212ENST00000638663 ZNF280AP59817 542 aaPredicted RBP24.99■■□□□ 1.59
SCARB2-212ENST00000638663 PPP4R3BQ5MIZ7 849 aa24.99■■□□□ 1.59
SCARB2-212ENST00000638663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.99■■□□□ 1.59
SCARB2-212ENST00000638663 NLRP5P59047 1200 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 SEPT2Q15019 361 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 NPY5RQ15761 445 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 ABCB5Q2M3G0 1257 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 TMEM39BQ9GZU3 492 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 KANSL2Q9H9L4 492 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 BRMS1Q9HCU9 246 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 HERC5Q9UII4 1024 aaKnown RBP24.98■■□□□ 1.59
SCARB2-212ENST00000638663 SNHG28P0DPA3 235 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 SLC39A14Q15043 492 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 L1TD1Q5T7N2 865 aaKnown RBP24.98■■□□□ 1.59
SCARB2-212ENST00000638663 LRSAM1Q6UWE0 723 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 TMEM179Q6ZVK1 233 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 CCAR1Q8IX12 1150 aaKnown RBP24.98■■□□□ 1.59
SCARB2-212ENST00000638663 UBA5Q9GZZ9 404 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 DACT1Q9NYF0 836 aa24.98■■□□□ 1.59
SCARB2-212ENST00000638663 EGFRP00533 1210 aa24.97■■□□□ 1.59
SCARB2-212ENST00000638663 EEF2P13639 858 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms