RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.16
SCARB2-208ENST00000638372 TLDC2A0PJX2 215 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 MAGEA1P43355 309 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 MYRIPQ8NFW9 859 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 PICK1Q9NRD5 415 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 NRBP1Q9UHY1 535 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 CAPN2P17655 700 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 VPS18Q9P253 973 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 ATP6V0A2Q9Y487 856 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 ARAP3Q8WWN8 1544 aa16.02■□□□□ 0.15
SCARB2-208ENST00000638372 MCAMP43121 646 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 JAKMIP2Q96AA8 810 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 CCDC50Q8IVM0 306 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 MYCT1Q8N699 235 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 SMIM23A6NLE4 172 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 DPCR1Q3MIW9 517 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 CCDC91Q7Z6B0 441 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 SYMPKQ92797 1274 aaKnown RBP16.01■□□□□ 0.15
SCARB2-208ENST00000638372 PSTPIP2Q9H939 334 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 COBLO75128 1261 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 DIXDC1Q155Q3 683 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-208ENST00000638372 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
SCARB2-208ENST00000638372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
SCARB2-208ENST00000638372 ERVV-1B6SEH8 477 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 GCNT3O95395 438 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 KIF23Q02241 960 aaPredicted RBP16■□□□□ 0.15
SCARB2-208ENST00000638372 PTPN21Q16825 1174 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 TPH2Q8IWU9 490 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 RSPH14Q9UHP6 348 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 B4DLN1 442 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 FNBP1Q96RU3 617 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 A0A1W2PQ27 194 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 A0A1W2PQ64 194 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 A0A1W2PQD8 194 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 TRIM37O94972 964 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 RBM6P78332 1123 aaKnown RBP16■□□□□ 0.15
SCARB2-208ENST00000638372 NEK8Q86SG6 692 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 CCDC25Q86WR0 208 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 LINC00301Q8NCQ3 95 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 RCOR1Q9UKL0 485 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 CDC42BPBQ9Y5S2 1711 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 CDC25AP30304 524 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 SLC9C1Q4G0N8 1177 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
SCARB2-208ENST00000638372 CSRNP2Q9H175 543 aa16■□□□□ 0.15
SCARB2-208ENST00000638372 MRPL44Q9H9J2 332 aaKnown RBP16■□□□□ 0.15
SCARB2-208ENST00000638372 PDE6BP35913 854 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 PRR16Q569H4 304 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 GSTA5Q7RTV2 222 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 PCDHB13Q9Y5F0 798 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 XDHP47989 1333 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 EXOC3O60645 756 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 KRT5P13647 590 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 MICALCLQ6ZW33 695 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 RRAGAQ7L523 313 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 CCDC84Q86UT8 332 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-208ENST00000638372 RASAL2Q9UJF2 1139 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 ZEB2O60315 1214 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 DDAH1O94760 285 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 OR52Z1P0C646 297 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 SMTNP53814 917 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 CERKLQ49MI3 558 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-208ENST00000638372 UTP14CQ5TAP6 766 aaKnown RBP15.99■□□□□ 0.15
SCARB2-208ENST00000638372 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
SCARB2-208ENST00000638372 RNF26Q9BY78 433 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-208ENST00000638372 SERPINB2P05120 415 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 TNFAIP3P21580 790 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 POLR3EQ9NVU0 708 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 GINS2Q9Y248 185 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 SOS2Q07890 1332 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-208ENST00000638372 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 TCP10L2B9ZVM9 353 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 OPA1O60313 960 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 USP17L8P0C7I0 530 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 TNNC1P63316 161 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 TYW1BQ6NUM6 668 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-208ENST00000638372 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 TSGA10Q9BZW7 698 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 IKBKGQ9Y6K9 419 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 TUBB4BP68371 445 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 GRAMD1CQ8IYS0 662 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
SCARB2-208ENST00000638372 PYCARDQ9ULZ3 195 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 KCNJ18B7U540 433 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 KCNJ12Q14500 433 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 NIM1KQ8IY84 436 aa15.98■□□□□ 0.15
SCARB2-208ENST00000638372 SECISBP2LQ93073 1101 aaKnown RBP15.98■□□□□ 0.15
SCARB2-208ENST00000638372 PAIP2Q9BPZ3 127 aaKnown RBP15.98■□□□□ 0.15
SCARB2-208ENST00000638372 A0A1W2PRG0 241 aa15.97■□□□□ 0.15
SCARB2-208ENST00000638372 SH2B2O14492 632 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-208ENST00000638372 ICA1Q05084 483 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms