RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 HDAC1Q13547 482 aaPredicted RBP22.68■■□□□ 1.22
CLN6-213ENST00000636212 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 DEFB118Q96PH6 123 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 HTATIP2Q9BUP3 242 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 NACAP1Q9BZK3 213 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 PORCNQ9H237 461 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 HMX1Q9NP08 348 aaPredicted RBP22.68■■□□□ 1.22
CLN6-213ENST00000636212 TMX2Q9Y320 296 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 SPDYE16A6NNV3 312 aaPredicted RBP22.67■■□□□ 1.22
CLN6-213ENST00000636212 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.67■■□□□ 1.224e-8■■■■□ 25.2
CLN6-213ENST00000636212 RPTORQ8N122 1335 aa22.66■■□□□ 1.22
CLN6-213ENST00000636212 FARP2O94887 1054 aaPredicted RBP22.66■■□□□ 1.22
CLN6-213ENST00000636212 ZKSCAN1P17029 563 aaPredicted RBP22.66■■□□□ 1.22
CLN6-213ENST00000636212 OTUD7AQ8TE49 926 aaPredicted RBP22.66■■□□□ 1.22
CLN6-213ENST00000636212 VCPKMTQ9H867 229 aa22.66■■□□□ 1.22
CLN6-213ENST00000636212 GOPCQ9HD26 462 aa22.66■■□□□ 1.22
CLN6-213ENST00000636212 PAK6Q9NQU5 681 aaPredicted RBP22.66■■□□□ 1.22
CLN6-213ENST00000636212 PATL2C9JE40 543 aaKnown RBP22.65■■□□□ 1.22
CLN6-213ENST00000636212 M0R2C6 588 aa22.65■■□□□ 1.22
CLN6-213ENST00000636212 CNMDO75829 334 aa22.65■■□□□ 1.22
CLN6-213ENST00000636212 SLC34A2O95436 690 aa22.65■■□□□ 1.22
CLN6-213ENST00000636212 MB21D1Q8N884 522 aa22.65■■□□□ 1.22
CLN6-213ENST00000636212 DPF3Q92784 378 aa22.65■■□□□ 1.22
CLN6-213ENST00000636212 APBA2Q99767 749 aa22.65■■□□□ 1.22
CLN6-213ENST00000636212 RWDD1Q9H446 243 aaPredicted RBP22.65■■□□□ 1.22
CLN6-213ENST00000636212 DOCK3Q8IZD9 2030 aa22.64■■□□□ 1.22
CLN6-213ENST00000636212 WDR46O15213 610 aaKnown RBP22.64■■□□□ 1.21
CLN6-213ENST00000636212 RAD21O60216 631 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 FLOT1O75955 427 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 SLC3A2P08195 630 aaKnown RBP22.64■■□□□ 1.21
CLN6-213ENST00000636212 EEF2P13639 858 aaKnown RBP22.64■■□□□ 1.21
CLN6-213ENST00000636212 MORN1Q5T089 497 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 CLEC10AQ8IUN9 316 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 SPICE1Q8N0Z3 855 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 STK11IPQ8N1F8 1099 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 TRIB2Q92519 343 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 BTBD7Q9P203 1132 aa22.64■■□□□ 1.21
CLN6-213ENST00000636212 SLC15A5A6NIM6 579 aa22.63■■□□□ 1.21
CLN6-213ENST00000636212 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
CLN6-213ENST00000636212 MAP2K5Q13163 448 aa22.63■■□□□ 1.21
CLN6-213ENST00000636212 ZNF444Q8N0Y2 327 aaPredicted RBP22.63■■□□□ 1.21
CLN6-213ENST00000636212 EVI5LQ96CN4 794 aa22.63■■□□□ 1.21
CLN6-213ENST00000636212 ROBO3Q96MS0 1386 aa22.63■■□□□ 1.21
CLN6-213ENST00000636212 DSG3P32926 999 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 ZMYM1Q5SVZ6 1142 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 POTEEQ6S8J3 1075 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 SAMD1Q6SPF0 538 aaPredicted RBP22.62■■□□□ 1.21
CLN6-213ENST00000636212 SIAH1Q8IUQ4 282 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 IFNL3Q8IZI9 196 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 USP6NLQ92738 828 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 NAPBQ9H115 298 aa22.62■■□□□ 1.21
CLN6-213ENST00000636212 PLXNB2O15031 1838 aa22.61■■□□□ 1.21
CLN6-213ENST00000636212 PRKAR2AP13861 404 aaKnown RBP22.61■■□□□ 1.21
CLN6-213ENST00000636212 PTPREP23469 700 aa22.61■■□□□ 1.21
CLN6-213ENST00000636212 PLS1Q14651 629 aa22.61■■□□□ 1.21
CLN6-213ENST00000636212 STAP2Q9UGK3 403 aa22.61■■□□□ 1.21
CLN6-213ENST00000636212 STRNO43815 780 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 RASA1P20936 1047 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 PDE1AP54750 535 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 PDE4BQ07343 736 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 TRIM32Q13049 653 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 KIAA1755Q5JYT7 1200 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 MFSD14CQ5VZR4 134 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 ANKLE1Q8NAG6 615 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 SEC62Q99442 399 aaKnown RBP22.6■■□□□ 1.21
CLN6-213ENST00000636212 SPATC1LQ9H0A9 340 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 CRISPLD2Q9H0B8 497 aa22.6■■□□□ 1.21
CLN6-213ENST00000636212 EPB41L4AQ9HCS5 686 aaPredicted RBP22.6■■□□□ 1.21
CLN6-213ENST00000636212 SALL3Q9BXA9 1300 aa22.59■■□□□ 1.21
CLN6-213ENST00000636212 UBE2Q1Q7Z7E8 422 aa22.59■■□□□ 1.21
CLN6-213ENST00000636212 SHCBP1Q8NEM2 672 aa22.59■■□□□ 1.21
CLN6-213ENST00000636212 MOV10L1Q9BXT6 1211 aaKnown RBP22.59■■□□□ 1.21
CLN6-213ENST00000636212 SLC5A4Q9NY91 659 aa22.59■■□□□ 1.21
CLN6-213ENST00000636212 NYAP2Q9P242 653 aa22.59■■□□□ 1.21
CLN6-213ENST00000636212 NR2E3Q9Y5X4 410 aa22.59■■□□□ 1.21
CLN6-213ENST00000636212 MAP3K21Q5TCX8 1036 aa22.58■■□□□ 1.21
CLN6-213ENST00000636212 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
CLN6-213ENST00000636212 DPP9Q86TI2 863 aa22.58■■□□□ 1.21
CLN6-213ENST00000636212 ATG4CQ96DT6 458 aa22.58■■□□□ 1.21
CLN6-213ENST00000636212 MROH8Q9H579 483 aa22.58■■□□□ 1.21
CLN6-213ENST00000636212 CACNB2Q08289 660 aaPredicted RBP22.57■■□□□ 1.2
CLN6-213ENST00000636212 GRB14Q14449 540 aa22.57■■□□□ 1.2
CLN6-213ENST00000636212 CCL14Q16627 93 aa22.57■■□□□ 1.2
CLN6-213ENST00000636212 NCAPG2Q86XI2 1143 aa22.57■■□□□ 1.2
CLN6-213ENST00000636212 TICAM2Q86XR7 235 aa22.57■■□□□ 1.2
CLN6-213ENST00000636212 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
CLN6-213ENST00000636212 BRCA2P51587 3418 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 PRDM1O75626 825 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 SLC25A27O95847 323 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 TSPY3P0CV98 308 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 TSPY8P0CW00 308 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 ERCC3P19447 782 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 HELLSQ9NRZ9 838 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 CLIP2Q9UDT6 1046 aa22.56■■□□□ 1.2
CLN6-213ENST00000636212 TRIM6-TRIM34B2RNG4 842 aa22.55■■□□□ 1.2
CLN6-213ENST00000636212 H0YGN5 161 aa22.55■■□□□ 1.2
CLN6-213ENST00000636212 HOXC6P09630 235 aa22.55■■□□□ 1.2
CLN6-213ENST00000636212 PPARAQ07869 468 aa22.55■■□□□ 1.2
CLN6-213ENST00000636212 PPP4R3BQ5MIZ7 849 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms