RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 COL4A1P02462 1669 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 PBX1P40424 430 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 NPY5RQ15761 445 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 MRFAP1Q9Y605 127 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 AHDC1Q5TGY3 1603 aaPredicted RBP21.78■■□□□ 1.08
PTBP1-220ENST00000627714 TERF2Q15554 542 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 IGSF22Q8N9C0 903 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 FAM84BQ96KN1 310 aaPredicted RBP21.78■■□□□ 1.08
PTBP1-220ENST00000627714 CRNKL1Q9BZJ0 848 aaKnown RBP21.78■■□□□ 1.08
PTBP1-220ENST00000627714 MINPP1Q9UNW1 487 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 ITIH6Q6UXX5 1313 aa21.78■■□□□ 1.08
PTBP1-220ENST00000627714 ZNF831Q5JPB2 1677 aa21.77■■□□□ 1.08
PTBP1-220ENST00000627714 COL5A3P25940 1745 aaPredicted RBP21.77■■□□□ 1.08
PTBP1-220ENST00000627714 A0A0G2JS52 829 aa21.77■■□□□ 1.08
PTBP1-220ENST00000627714 ATP8A2Q9NTI2 1148 aa21.77■■□□□ 1.08
PTBP1-220ENST00000627714 FHOD1Q9Y613 1164 aa21.77■■□□□ 1.08
PTBP1-220ENST00000627714 ROBO1Q9Y6N7 1651 aa21.77■■□□□ 1.07
PTBP1-220ENST00000627714 PPP1R3GB7ZBB8 358 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 USP17L12C9JPN9 530 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 USP17L21D6R901 530 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 SCG2P13521 617 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 CD44P16070 742 aaKnown RBP21.76■■□□□ 1.07
PTBP1-220ENST00000627714 PTGDRQ13258 359 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 ZNF174Q15697 407 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 ERFEQ4G0M1 354 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 ZNF771Q7L3S4 317 aaPredicted RBP21.76■■□□□ 1.07
PTBP1-220ENST00000627714 FBXO33Q7Z6M2 555 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 CNGA4Q8IV77 575 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 GPR161Q8N6U8 529 aaKnown RBP21.76■■□□□ 1.07
PTBP1-220ENST00000627714 KIFC2Q96AC6 838 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 ACSBG1Q96GR2 724 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 WDR24Q96S15 920 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 ARPP21Q9UBL0 812 aaPredicted RBP21.76■■□□□ 1.07
PTBP1-220ENST00000627714 CYP2D7A0A087X1C5 515 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 ZRANB2O95218 330 aaKnown RBP eCLIP21.76■■□□□ 1.075e-7■■■■□ 22.3
PTBP1-220ENST00000627714 SPAG1Q07617 926 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 KLHL10Q6JEL2 608 aa21.76■■□□□ 1.07
PTBP1-220ENST00000627714 FAM177A1Q8N128 213 aaPredicted RBP21.76■■□□□ 1.07
PTBP1-220ENST00000627714 NSUN4Q96CB9 384 aaKnown RBP21.76■■□□□ 1.07
PTBP1-220ENST00000627714 MAST2Q6P0Q8 1798 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 CASZ1Q86V15 1759 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 hCG_1642624A0A1W2PR95 340 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 SMIM22K7EJ46 135 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 PPP2R3AQ06190 1150 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 SBK1Q52WX2 424 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 SRBD1Q8N5C6 995 aaKnown RBP21.75■■□□□ 1.07
PTBP1-220ENST00000627714 ZNF384Q8TF68 577 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 NRAPQ86VF7 1730 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 TEX33O43247 280 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 PNMA6AP0CW24 399 aaPredicted RBP21.75■■□□□ 1.07
PTBP1-220ENST00000627714 CALML3P27482 149 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 KIF5BP33176 963 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 E2F4Q16254 413 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 PFKFB3Q16875 520 aaPredicted RBP21.75■■□□□ 1.07
PTBP1-220ENST00000627714 ARL6IP4Q66PJ3 421 aaKnown RBP21.75■■□□□ 1.07
PTBP1-220ENST00000627714 RMND1Q9NWS8 449 aa21.75■■□□□ 1.07
PTBP1-220ENST00000627714 MYH13Q9UKX3 1938 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 ZBTB22O15209 634 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 MFAP3LO75121 409 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 NLRP5P59047 1200 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 TUBB2AQ13885 445 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 MARCH10Q8NA82 808 aaPredicted RBP21.74■■□□□ 1.07
PTBP1-220ENST00000627714 TUBB2BQ9BVA1 445 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 GTPBP6O43824 516 aaPredicted RBP21.74■■□□□ 1.07
PTBP1-220ENST00000627714 FECHP22830 423 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 RBL2Q08999 1139 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 SLC10A5Q5PT55 438 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 DCP1AQ9NPI6 582 aaPredicted RBP21.74■■□□□ 1.07
PTBP1-220ENST00000627714 RWDD2AQ9UIY3 292 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 ADGRG1Q9Y653 693 aa21.74■■□□□ 1.07
PTBP1-220ENST00000627714 XDHP47989 1333 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 WNT7AO00755 349 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 IGSF3O75054 1194 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 STX17P56962 302 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 ANKRD20A12PQ8NF67 263 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 RABGGTAQ92696 567 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 SH3GLB2Q9NR46 395 aa21.73■■□□□ 1.07
PTBP1-220ENST00000627714 LIMA1Q9UHB6 759 aaKnown RBP21.73■■□□□ 1.07
PTBP1-220ENST00000627714 LRRC10BA6NIK2 292 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 MECOMQ03112 1051 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 TRIM14Q14142 442 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 PDXDC2PQ6P474 469 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 RSRC2Q7L4I2 434 aaKnown RBP21.72■■□□□ 1.07
PTBP1-220ENST00000627714 DESI2Q9BSY9 194 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 SOWAHDA6NJG2 315 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 LONP1P36776 959 aaKnown RBP21.72■■□□□ 1.07
PTBP1-220ENST00000627714 TXLNAP40222 546 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 JAKMIP3Q5VZ66 844 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 PIK3AP1Q6ZUJ8 805 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 RASGRP2Q7LDG7 609 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 CCDC12Q8WUD4 166 aaPredicted RBP21.72■■□□□ 1.07
PTBP1-220ENST00000627714 GOLGA1Q92805 767 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 ANKRD2Q9GZV1 360 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 CTNND2Q9UQB3 1225 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 KIAA1551Q9HCM1 1747 aa21.72■■□□□ 1.07
PTBP1-220ENST00000627714 KIF5CO60282 957 aa21.71■■□□□ 1.07
PTBP1-220ENST00000627714 ADAMTS2O95450 1211 aa21.71■■□□□ 1.07
PTBP1-220ENST00000627714 TUBB4BP68371 445 aa21.71■■□□□ 1.07
PTBP1-220ENST00000627714 C3orf67Q6ZVT6 689 aa21.71■■□□□ 1.07
PTBP1-220ENST00000627714 MRPL44Q9H9J2 332 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms