RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 PDE6AP16499 860 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 ADD2P35612 726 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 LDLRAD1Q5T700 205 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 SVIPQ8NHG7 77 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
LINC00538-201ENST00000626109 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
LINC00538-201ENST00000626109 RBSNQ9H1K0 784 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 OSBPL2Q9H1P3 480 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 HIP1RO75146 1068 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 TGFB3P10600 412 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
LINC00538-201ENST00000626109 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 OGFOD1Q8N543 542 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 C8orf48Q96LL4 319 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
LINC00538-201ENST00000626109 GMLQ99445 158 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
LINC00538-201ENST00000626109 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
LINC00538-201ENST00000626109 USP17L8P0C7I0 530 aa13.36□□□□□ -0.27
LINC00538-201ENST00000626109 CYP7A1P22680 504 aa13.36□□□□□ -0.27
LINC00538-201ENST00000626109 TMEM164Q5U3C3 297 aa13.36□□□□□ -0.27
LINC00538-201ENST00000626109 STK32AQ8WU08 396 aa13.36□□□□□ -0.27
LINC00538-201ENST00000626109 DPF2Q92785 391 aa13.36□□□□□ -0.27
LINC00538-201ENST00000626109 AVENQ9NQS1 362 aaPredicted RBP13.36□□□□□ -0.27
LINC00538-201ENST00000626109 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
LINC00538-201ENST00000626109 SYCE3A1L190 88 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 MCM5P33992 734 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 SCNN1AP37088 669 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 GNALP38405 381 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 SCNN1DP51172 638 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 CWC27Q6UX04 472 aaKnown RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 APPBP2Q92624 585 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 TEKT1Q969V4 418 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 GOLGB1Q14789 3259 aaKnown RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 SSR1P43307 286 aaKnown RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 TM6SF1Q9BZW5 370 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 MROH7-TTC4A0A0A0MT08 1334 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 MYO5AQ9Y4I1 1855 aaKnown RBP13.35□□□□□ -0.27
LINC00538-201ENST00000626109 MYH7P12883 1935 aa13.35□□□□□ -0.27
LINC00538-201ENST00000626109 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 SMAPO00193 183 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 IFRD1O00458 451 aaPredicted RBP13.34□□□□□ -0.27
LINC00538-201ENST00000626109 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
LINC00538-201ENST00000626109 CRKP46108 304 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC00538-201ENST00000626109 NMIQ13287 307 aaPredicted RBP13.34□□□□□ -0.27
LINC00538-201ENST00000626109 MAPRE1Q15691 268 aaKnown RBP13.34□□□□□ -0.27
LINC00538-201ENST00000626109 ZMYM1Q5SVZ6 1142 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 HHIPL2Q6UWX4 724 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 TTC14Q96N46 770 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 MRIQ9BWK5 157 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.34□□□□□ -0.27
LINC00538-201ENST00000626109 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 SMC3Q9UQE7 1217 aa13.34□□□□□ -0.27
LINC00538-201ENST00000626109 GAKO14976 1311 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 CHGBP05060 677 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 C10orf62Q5T681 223 aaPredicted RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 VPS53Q5VIR6 699 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 GPRC5DQ9NZD1 345 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 CCDC39Q9UFE4 941 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 CNOT7Q9UIV1 285 aaKnown RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 NOL7Q9UMY1 257 aaKnown RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 CYP46A1Q9Y6A2 500 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 H7C1D1 291 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 BAG3O95817 575 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 TPM2P07951 284 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 AK2P54819 239 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 RBL2Q08999 1139 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 CFAP100Q494V2 611 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 USP48Q86UV5 1035 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.28
LINC00538-201ENST00000626109 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 UCN2Q96RP3 112 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 SEZ6LQ9BYH1 1024 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 CXorf56Q9H5V9 222 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 DAGLAQ9Y4D2 1042 aa13.33□□□□□ -0.28
LINC00538-201ENST00000626109 A0A0D9SFI3 127 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms