RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SGSM2O43147 1006 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 FCGRTP55899 365 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 TFAP4Q01664 338 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 ZYXQ15942 572 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 ESR2Q92731 530 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 HOXC10Q9NYD6 342 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 CPA4Q9UI42 421 aa16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-216ENST00000626000 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 PRDM1O75626 825 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 HERVK_113P62684 666 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 FBXO46Q6PJ61 603 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 CATSPERGQ6ZRH7 1159 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 MB21D1Q8N884 522 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 MKL1Q969V6 931 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 MORF4L1Q9UBU8 362 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 TRIM17Q9Y577 477 aa16.56■□□□□ 0.24
SNRPA1-216ENST00000626000 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 SMIM22K7EJ46 135 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 CDC45O75419 566 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 CCNA1P78396 465 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 CTDSPL2Q05D32 466 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 GMCL1P1Q8NEA9 526 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 CD99L2Q8TCZ2 262 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 KRT23Q9C075 422 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 TCP11L1Q9NUJ3 509 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
SNRPA1-216ENST00000626000 TRDNQ13061 729 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 COG2Q14746 738 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 OTOP1Q7RTM1 612 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 SIAH1Q8IUQ4 282 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 GPRC5AQ8NFJ5 357 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 TTC14Q96N46 770 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
SNRPA1-216ENST00000626000 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 PSMC4P43686 418 aa16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 HAND2P61296 217 aa16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 ESYT1Q9BSJ8 1104 aa16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
SNRPA1-216ENST00000626000 F5H6K3 240 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 EIF5BO60841 1220 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 FDX1P10109 184 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 MAPK4P31152 587 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 KLRC3Q07444 240 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 COA7Q96BR5 231 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
SNRPA1-216ENST00000626000 MGAMO43451 1857 aa16.52■□□□□ 0.23
SNRPA1-216ENST00000626000 TNPO2O14787 897 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 FLOT1O75955 427 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 COPB2P35606 906 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 NOVP48745 357 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 RNF20Q5VTR2 975 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 CLEC10AQ8IUN9 316 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 MAP4K1Q92918 833 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
SNRPA1-216ENST00000626000 RAD21O60216 631 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 CAPN15O75808 1086 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 ERVK-24P63145 666 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 SOCS4Q8WXH5 440 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
SNRPA1-216ENST00000626000 A0A0G2JMZ2 1700 aa16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 SPDYE16A6NNV3 312 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 NDUFB10O96000 172 aa16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 DSG3P32926 999 aa16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 UBAC1Q9BSL1 405 aa16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-216ENST00000626000 PLA2G6O60733 806 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 IRF5Q13568 498 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 SLFN13Q68D06 897 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms