RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CDH24Q86UP0 819 aa6.14□□□□□ -1.43
CDR1-202ENST00000625883 TOP6BLQ8N6T0 577 aa6.14□□□□□ -1.43
CDR1-202ENST00000625883 GATA6Q92908 595 aa6.14□□□□□ -1.43
CDR1-202ENST00000625883 TP53INP1Q96A56 240 aa6.14□□□□□ -1.43
CDR1-202ENST00000625883 KREMEN1Q96MU8 473 aa6.14□□□□□ -1.43
CDR1-202ENST00000625883 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
CDR1-202ENST00000625883 CNTNAP4Q9C0A0 1308 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 CBFA2T2O43439 604 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
CDR1-202ENST00000625883 EOMESO95936 686 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 SLC10A6Q3KNW5 377 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 MTERF2Q49AM1 385 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 PAOXQ6QHF9 649 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 CLEC10AQ8IUN9 316 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 HAUS7Q99871 368 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 FAM83CQ9BQN1 747 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 ZMYM5Q9UJ78 669 aa6.13□□□□□ -1.43
CDR1-202ENST00000625883 SHOXO15266 292 aa6.12□□□□□ -1.43
CDR1-202ENST00000625883 ADMP35318 185 aa6.12□□□□□ -1.43
CDR1-202ENST00000625883 DCAF15Q66K64 600 aa6.12□□□□□ -1.43
CDR1-202ENST00000625883 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
CDR1-202ENST00000625883 SMARCC1Q92922 1105 aaPredicted RBP6.12□□□□□ -1.43
CDR1-202ENST00000625883 ZNF669Q96BR6 464 aaPredicted RBP6.12□□□□□ -1.43
CDR1-202ENST00000625883 C7orf69Q9H7B7 122 aa6.12□□□□□ -1.43
CDR1-202ENST00000625883 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
CDR1-202ENST00000625883 HMX2A2RU54 273 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 EPHX1P07099 455 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 FURINP09958 794 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 FAM87AP0C7U9 286 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 FAM214BQ7L5A3 538 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 CCDC144CPQ8IYA2 1237 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 SHISA5Q8N114 240 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
CDR1-202ENST00000625883 JMYQ8N9B5 988 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 SH3TC2Q8TF17 1288 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
CDR1-202ENST00000625883 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 KDM2BQ8NHM5 1336 aa6.11□□□□□ -1.43
CDR1-202ENST00000625883 ENPP3O14638 875 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 ETV3P41162 512 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 ZNF143P52747 638 aaPredicted RBP6.1□□□□□ -1.43
CDR1-202ENST00000625883 RNF4P78317 190 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 SSRP1Q08945 709 aaKnown RBP6.1□□□□□ -1.43
CDR1-202ENST00000625883 TCEAL1Q15170 157 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 ZAR1Q86SH2 424 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 SLC51AQ86UW1 340 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 FBXL18Q96ME1 805 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 ASPNQ9BXN1 380 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 EPN3Q9H201 632 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 APEX2Q9UBZ4 518 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 RAXQ9Y2V3 346 aa6.1□□□□□ -1.43
CDR1-202ENST00000625883 ANKRD34BA5PLL1 514 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 LRRN2O75325 713 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 CHMP4BP1P59074 171 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 SQSTM1Q13501 440 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.43
CDR1-202ENST00000625883 ANKRD39Q53RE8 183 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 C2orf27AQ580R0 203 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 EGFLAMQ63HQ2 1017 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 HEATR6Q6AI08 1181 aaKnown RBP6.09□□□□□ -1.43
CDR1-202ENST00000625883 PRR23CQ6ZRP0 262 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 C7orf61Q8IZ16 206 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 FGD4Q96M96 766 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
CDR1-202ENST00000625883 ZNF451Q9Y4E5 1061 aa6.09□□□□□ -1.43
CDR1-202ENST00000625883 ESYT3A0FGR9 886 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 ADCY3O60266 1144 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 ADAM23O75077 832 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 CD247P20963 164 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 CANXP27824 592 aaKnown RBP6.09□□□□□ -1.44
CDR1-202ENST00000625883 SNW1Q13573 536 aaKnown RBP6.09□□□□□ -1.44
CDR1-202ENST00000625883 RSPO4Q2I0M5 234 aaPredicted RBP6.09□□□□□ -1.44
CDR1-202ENST00000625883 NBPF9Q3BBW0 867 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 NKAPLQ5M9Q1 402 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 OGFOD3Q6PK18 319 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 ZNF662Q6ZS27 426 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 THAP3Q8WTV1 239 aaPredicted RBP6.09□□□□□ -1.44
CDR1-202ENST00000625883 Q96M66 194 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 HEXIM2Q96MH2 286 aaKnown RBP6.09□□□□□ -1.44
CDR1-202ENST00000625883 TBC1D32Q96NH3 1257 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 SPATA9Q9BWV2 254 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 SEMA6BQ9H3T3 888 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 TMEM260Q9NX78 707 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 STOML1Q9UBI4 398 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.44
CDR1-202ENST00000625883 FAM170BA6NMN3 283 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 GSC2O15499 205 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 DYRK3O43781 588 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 NAT2P11245 290 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 GIMAP7Q8NHV1 300 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 MFSD14AQ96MC6 490 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 APBA2Q99767 749 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 LGR4Q9BXB1 951 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
CDR1-202ENST00000625883 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
CDR1-202ENST00000625883 A0A1W2PQU0 124 aa6.07□□□□□ -1.44
CDR1-202ENST00000625883 PRR33A8MZF0 331 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms