RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TRIM34Q9BYJ4 488 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 SCAF8Q9UPN6 1271 aaKnown RBP8.77□□□□□ -1.01
VPS45-213ENST00000618148 ERICH2A1L162 156 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 ADM5C9JUS6 153 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 CTNND1O60716 968 aaKnown RBP8.76□□□□□ -1.01
VPS45-213ENST00000618148 DDAH1O94760 285 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 LARGE1O95461 756 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 FGD1P98174 961 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 APOBRQ0VD83 1088 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 TROAPQ12815 778 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 MAP3K11Q16584 847 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 ABCB5Q2M3G0 1257 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 NOL9Q5SY16 702 aaKnown RBP8.76□□□□□ -1.01
VPS45-213ENST00000618148 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 MKL1Q969V6 931 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 KLRG1Q96E93 195 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 ZKSCAN3Q9BRR0 538 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 ZNF341Q9BYN7 854 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 KANSL2Q9H9L4 492 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 RRAGCQ9HB90 399 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 NMRK2Q9NPI5 230 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 NYAP2Q9P242 653 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 ZBTB21Q9ULJ3 1066 aa8.76□□□□□ -1.01
VPS45-213ENST00000618148 KLF18A0A0U1RQI7 1052 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 TTLL1O95922 423 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 GH2P01242 217 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 ASNSP08243 561 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 TOP1P11387 765 aaKnown RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 PPP2R5BQ15173 497 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 SHROOM1Q2M3G4 852 aaPredicted RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 EAPPQ56P03 285 aaPredicted RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 IFIT1BQ5T764 474 aaKnown RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 MIGA2Q7L4E1 593 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 SIAH1Q8IUQ4 282 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 ZNF654Q8IZM8 581 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 CDCA5Q96FF9 252 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 TMEM47Q9BQJ4 181 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 DOCK1Q14185 1865 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 CCDC69A6NI79 296 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 GOLGA8BA8MQT2 603 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 ZBTB43O43298 467 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 GDF11O95390 407 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 SNHG28P0DPA3 235 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 DDIT3P35638 169 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 SCRN1Q12765 414 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 SEPT2Q15019 361 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 PRAMEF18Q5VWM3 479 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 USP48Q86UV5 1035 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS45-213ENST00000618148 CHMP4CQ96CF2 233 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 LLPHQ9BRT6 129 aaKnown RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 GLIS2Q9BZE0 524 aaPredicted RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 FAM217BQ9NTX9 383 aaPredicted RBP8.75□□□□□ -1.01
VPS45-213ENST00000618148 SLC12A7Q9Y666 1083 aa8.75□□□□□ -1.01
VPS45-213ENST00000618148 ATAD5Q96QE3 1844 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 OTOFQ9HC10 1997 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 USP2O75604 605 aaPredicted RBP8.74□□□□□ -1.01
VPS45-213ENST00000618148 CALM1P0DP23 149 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 CALM2P0DP24 149 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 CALM3P0DP25 149 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 ICA1Q05084 483 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 NOL8Q76FK4 1167 aaKnown RBP8.74□□□□□ -1.01
VPS45-213ENST00000618148 CATIPQ7Z7H3 387 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 PNMA1Q8ND90 353 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 GMCL1P1Q8NEA9 526 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
VPS45-213ENST00000618148 CABP5Q9NP86 173 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 STX8Q9UNK0 236 aa8.74□□□□□ -1.01
VPS45-213ENST00000618148 MPHOSPH10O00566 681 aaKnown RBP8.73□□□□□ -1.01
VPS45-213ENST00000618148 PPP1R12BO60237 982 aaPredicted RBP8.73□□□□□ -1.01
VPS45-213ENST00000618148 ITGBL1O95965 494 aaPredicted RBP8.73□□□□□ -1.01
VPS45-213ENST00000618148 EEF2P13639 858 aaKnown RBP8.73□□□□□ -1.01
VPS45-213ENST00000618148 INPP5BP32019 993 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS45-213ENST00000618148 FUT2Q10981 343 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 GRM4Q14833 912 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 NTRK3Q16288 839 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
VPS45-213ENST00000618148 DLK2Q6UY11 383 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 NFXL1Q6ZNB6 911 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 MICU3Q86XE3 530 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 SCYL3Q8IZE3 742 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 NECAB1Q8N987 351 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 FANCBQ8NB91 859 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 SMARCC2Q8TAQ2 1214 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 WRNIP1Q96S55 665 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 WDR18Q9BV38 432 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 SLKQ9H2G2 1235 aaPredicted RBP8.73□□□□□ -1.01
VPS45-213ENST00000618148 KAT14Q9H8E8 782 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 TMX2Q9Y320 296 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 MYH4Q9Y623 1939 aa8.73□□□□□ -1.01
VPS45-213ENST00000618148 CCDC196A0A1B0GTZ2 297 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 A0A1W2PRG0 241 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 DHX16O60231 1041 aaKnown RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 CTDNEP1O95476 244 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 PDHBP11177 359 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 IFNAR1P17181 557 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms