RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 PEX10O60683 326 aa26.39■■□□□ 1.82
CBWD3-212ENST00000616550 PRDM1O75626 825 aa26.39■■□□□ 1.82
CBWD3-212ENST00000616550 VPS53Q5VIR6 699 aa26.39■■□□□ 1.82
CBWD3-212ENST00000616550 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.39■■□□□ 1.82
CBWD3-212ENST00000616550 TANGO6Q9C0B7 1094 aa26.39■■□□□ 1.82
CBWD3-212ENST00000616550 HOXC10Q9NYD6 342 aa26.39■■□□□ 1.82
CBWD3-212ENST00000616550 BIN2Q9UBW5 565 aaPredicted RBP26.39■■□□□ 1.82
CBWD3-212ENST00000616550 MYCP01106 439 aaPredicted RBP26.38■■□□□ 1.81
CBWD3-212ENST00000616550 COG2Q14746 738 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 Q3C1V9 767 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 LBX2Q6XYB7 198 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 SPICE1Q8N0Z3 855 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 SLAIN1Q8ND83 568 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 GOPCQ9HD26 462 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 HTTP42858 3142 aa26.38■■□□□ 1.81
CBWD3-212ENST00000616550 FOXP2O15409 715 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 ADCY3O60266 1144 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 MAPK4P31152 587 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 IRF5Q13568 498 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 ALX1Q15699 326 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 KIAA1755Q5JYT7 1200 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 POTEEQ6S8J3 1075 aa26.37■■□□□ 1.81
CBWD3-212ENST00000616550 KIAA0100Q14667 2235 aaKnown RBP26.37■■□□□ 1.81
CBWD3-212ENST00000616550 GREB1LQ9C091 1923 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-212ENST00000616550 POTEFA5A3E0 1075 aa26.36■■□□□ 1.81
CBWD3-212ENST00000616550 SPDYE16A6NNV3 312 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-212ENST00000616550 HIP1O00291 1037 aa26.36■■□□□ 1.81
CBWD3-212ENST00000616550 PDE4AP27815 886 aa26.36■■□□□ 1.81
CBWD3-212ENST00000616550 MFAP1P55081 439 aaKnown RBP26.36■■□□□ 1.81
CBWD3-212ENST00000616550 CCNA1P78396 465 aa26.36■■□□□ 1.81
CBWD3-212ENST00000616550 NYAP2Q9P242 653 aa26.36■■□□□ 1.81
CBWD3-212ENST00000616550 WDR46O15213 610 aaKnown RBP26.35■■□□□ 1.81
CBWD3-212ENST00000616550 RAD21O60216 631 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 TSPY3P0CV98 308 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 TSPY8P0CW00 308 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 UBXN2AP68543 259 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 PXYLP1Q8TE99 480 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 CWC22Q9HCG8 908 aaKnown RBP26.35■■□□□ 1.81
CBWD3-212ENST00000616550 DIAPH3Q9NSV4 1193 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 CCDC171Q6TFL3 1326 aa26.35■■□□□ 1.81
CBWD3-212ENST00000616550 CNMDO75829 334 aa26.34■■□□□ 1.81
CBWD3-212ENST00000616550 FLOT1O75955 427 aa26.34■■□□□ 1.81
CBWD3-212ENST00000616550 HSPD1P10809 573 aaKnown RBP26.34■■□□□ 1.81
CBWD3-212ENST00000616550 CTDSPL2Q05D32 466 aa26.34■■□□□ 1.81
CBWD3-212ENST00000616550 ZNF589Q86UQ0 364 aaPredicted RBP26.34■■□□□ 1.81
CBWD3-212ENST00000616550 CLIP2Q9UDT6 1046 aa26.34■■□□□ 1.81
CBWD3-212ENST00000616550 GJD2Q9UKL4 321 aa26.34■■□□□ 1.81
CBWD3-212ENST00000616550 FGAP02671 866 aa26.33■■□□□ 1.81
CBWD3-212ENST00000616550 CWC27Q6UX04 472 aaKnown RBP26.33■■□□□ 1.81
CBWD3-212ENST00000616550 PORCNQ9H237 461 aa26.33■■□□□ 1.81
CBWD3-212ENST00000616550 ANAPC4Q9UJX5 808 aa26.33■■□□□ 1.81
CBWD3-212ENST00000616550 RBBP6Q7Z6E9 1792 aaKnown RBP26.33■■□□□ 1.8
CBWD3-212ENST00000616550 IGKV6D-41A0A0C4DH26 115 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 ELNP15502 786 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 TFAP4Q01664 338 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 MTFR1Q15390 333 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 FAM47AQ5JRC9 791 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 NEDD1Q8NHV4 660 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 CEP95Q96GE4 821 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 NUDT12Q9BQG2 462 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 MTMR4Q9NYA4 1195 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 BTBD7Q9P203 1132 aa26.32■■□□□ 1.8
CBWD3-212ENST00000616550 MYH4Q9Y623 1939 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 CENPFP49454 3210 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 DSG3P32926 999 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 TTC22Q5TAA0 569 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 WDR78Q5VTH9 848 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 SAMD1Q6SPF0 538 aaPredicted RBP26.31■■□□□ 1.8
CBWD3-212ENST00000616550 GPR142Q7Z601 462 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 PLEKHH3Q7Z736 793 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 MB21D1Q8N884 522 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 SOCS4Q8WXH5 440 aa26.31■■□□□ 1.8
CBWD3-212ENST00000616550 TTLL1O95922 423 aa26.3■■□□□ 1.8
CBWD3-212ENST00000616550 EN2P19622 333 aaPredicted RBP26.3■■□□□ 1.8
CBWD3-212ENST00000616550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.3■■□□□ 1.8
CBWD3-212ENST00000616550 RLFQ13129 1914 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 TSPY2A6NKD2 308 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 F5H6K3 240 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 INHAP05111 366 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 CCL5P13501 91 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 KLRC3Q07444 240 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 PPP4R3BQ5MIZ7 849 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 FAM83BQ5T0W9 1011 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 MKL1Q969V6 931 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 RNF208Q9H0X6 261 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 INCENPQ9NQS7 918 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 ZMYM6O95789 1325 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 PLIN4Q96Q06 1357 aa26.29■■□□□ 1.8
CBWD3-212ENST00000616550 CYP2B6P20813 491 aa26.28■■□□□ 1.8
CBWD3-212ENST00000616550 SYNPO2Q9UMS6 1093 aa26.28■■□□□ 1.8
CBWD3-212ENST00000616550 PLXNB2O15031 1838 aa26.28■■□□□ 1.8
CBWD3-212ENST00000616550 RANBP6O60518 1105 aaKnown RBP26.27■■□□□ 1.8
CBWD3-212ENST00000616550 GSPT1P15170 499 aaKnown RBP26.27■■□□□ 1.8
CBWD3-212ENST00000616550 ATG4CQ96DT6 458 aa26.27■■□□□ 1.8
CBWD3-212ENST00000616550 TOMM22Q9NS69 142 aa26.27■■□□□ 1.8
CBWD3-212ENST00000616550 IVNS1ABPQ9Y6Y0 642 aa26.27■■□□□ 1.8
CBWD3-212ENST00000616550 ORC4O43929 436 aa26.26■■□□□ 1.79
CBWD3-212ENST00000616550 NDUFB10O96000 172 aa26.26■■□□□ 1.79
CBWD3-212ENST00000616550 RGS2P41220 211 aa26.26■■□□□ 1.79
CBWD3-212ENST00000616550 PLS1Q14651 629 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms