RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 ATRNL1Q5VV63 1379 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 CPLX1O14810 134 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 ZBTB43O43298 467 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 DHX16O60231 1041 aaKnown RBP9.81□□□□□ -0.84
PSMB3-208ENST00000613870 NMT2O60551 498 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 FKTNO75072 461 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 LARGE1O95461 756 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 FGRP09769 529 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 NT5C2P49902 561 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 CERKLQ49MI3 558 aaPredicted RBP9.81□□□□□ -0.84
PSMB3-208ENST00000613870 DCAF15Q66K64 600 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 CPLX2Q6PUV4 134 aaKnown RBP9.81□□□□□ -0.84
PSMB3-208ENST00000613870 MICU3Q86XE3 530 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 ERO1BQ86YB8 467 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 CCDC144CPQ8IYA2 1237 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 NKX2-3Q8TAU0 364 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 IGDCC4Q8TDY8 1250 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 BRI3BPQ8WY22 251 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 OTUD5Q96G74 571 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 ZNF274Q96GC6 653 aaPredicted RBP9.81□□□□□ -0.84
PSMB3-208ENST00000613870 ZNF341Q9BYN7 854 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 EHD4Q9H223 541 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 KAT14Q9H8E8 782 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 LY9Q9HBG7 655 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 BRPF3Q9ULD4 1205 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 ISY1Q9ULR0 285 aaKnown RBP9.81□□□□□ -0.84
PSMB3-208ENST00000613870 STX8Q9UNK0 236 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 CSADQ9Y600 493 aa9.81□□□□□ -0.84
PSMB3-208ENST00000613870 MYH1P12882 1939 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 CCL15-CCL14A0A0B4J2E2 113 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 GOLGA8AA7E2F4 631 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 IRF6O14896 467 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 RAD21O60216 631 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 SLURP2P0DP57 97 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 AKR1B1P15121 316 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 RXRAP19793 462 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 PDIA3P30101 505 aaKnown RBP9.8□□□□□ -0.84
PSMB3-208ENST00000613870 LIFRP42702 1097 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
PSMB3-208ENST00000613870 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 CRHR2Q13324 411 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 CCL15Q16663 113 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 ABCB5Q2M3G0 1257 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 ENAHQ8N8S7 591 aaPredicted RBP9.8□□□□□ -0.84
PSMB3-208ENST00000613870 CCDC17Q96LX7 622 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 MYL10Q9BUA6 226 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 NCOA5Q9HCD5 579 aaKnown RBP9.8□□□□□ -0.84
PSMB3-208ENST00000613870 CABP5Q9NP86 173 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 HERC5Q9UII4 1024 aaKnown RBP9.8□□□□□ -0.84
PSMB3-208ENST00000613870 BRCA2P51587 3418 aa9.8□□□□□ -0.84
PSMB3-208ENST00000613870 PHF20L1A8MW92 1017 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 PFKFB2O60825 505 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 GDF11O95390 407 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 SHMT1P34896 483 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 GTF2A2P52657 109 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 PPATQ06203 517 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 GABPAQ06546 454 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 PPIL2Q13356 520 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 CUL4AQ13619 759 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 RAB3GAP1Q15042 981 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 OTUD7BQ6GQQ9 843 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 APOA5Q6Q788 366 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 ZNF654Q8IZM8 581 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 FAM184AQ8NB25 1140 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 NEDD1Q8NHV4 660 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
PSMB3-208ENST00000613870 CDK5RAP2Q96SN8 1893 aa9.79□□□□□ -0.84
PSMB3-208ENST00000613870 TNRC18O15417 2968 aaPredicted RBP9.78□□□□□ -0.84
PSMB3-208ENST00000613870 DTNBO60941 627 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CDKL5O76039 1030 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CALM1P0DP23 149 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CALM2P0DP24 149 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CALM3P0DP25 149 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 RGS19P49795 217 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CAP1Q01518 475 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 SCRN1Q12765 414 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 SEC23AQ15436 765 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 PKN2Q16513 984 aaKnown RBP9.78□□□□□ -0.84
PSMB3-208ENST00000613870 RTN1Q16799 776 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 NOL9Q5SY16 702 aaKnown RBP9.78□□□□□ -0.84
PSMB3-208ENST00000613870 FBXL16Q8N461 479 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CTCFLQ8NI51 663 aaPredicted RBP9.78□□□□□ -0.84
PSMB3-208ENST00000613870 DDX11Q96FC9 970 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CEP95Q96GE4 821 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
PSMB3-208ENST00000613870 TCP11L1Q9NUJ3 509 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 CLIP2Q9UDT6 1046 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 HPS5Q9UPZ3 1129 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 KIF3AQ9Y496 699 aa9.78□□□□□ -0.84
PSMB3-208ENST00000613870 COL2A1P02458 1487 aaPredicted RBP9.78□□□□□ -0.84
PSMB3-208ENST00000613870 PHIPQ8WWQ0 1821 aa9.77□□□□□ -0.84
PSMB3-208ENST00000613870 CCDC196A0A1B0GTZ2 297 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms