RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 PTPRAP18433 802 aa13.95□□□□□ -0.18
VPS45-212ENST00000611412 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS45-212ENST00000611412 EVCP57679 992 aa13.95□□□□□ -0.18
VPS45-212ENST00000611412 CMTR1Q8N1G2 835 aaKnown RBP13.95□□□□□ -0.18
VPS45-212ENST00000611412 ZNF274Q96GC6 653 aaPredicted RBP13.95□□□□□ -0.18
VPS45-212ENST00000611412 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
VPS45-212ENST00000611412 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
VPS45-212ENST00000611412 CSADQ9Y600 493 aa13.95□□□□□ -0.18
VPS45-212ENST00000611412 ZHX2Q9Y6X8 837 aa13.95□□□□□ -0.18
VPS45-212ENST00000611412 MYH4Q9Y623 1939 aa13.95□□□□□ -0.18
VPS45-212ENST00000611412 USP17L5A8MUK1 530 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 PFKFB2O60825 505 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 GOLGA8HP0CJ92 632 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 CDC27P30260 824 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
VPS45-212ENST00000611412 TROAPQ12815 778 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 ZSCAN31Q96LW9 406 aaPredicted RBP13.94□□□□□ -0.18
VPS45-212ENST00000611412 ARHGEF10LQ9HCE6 1279 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
VPS45-212ENST00000611412 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 FRMPD2Q68DX3 1309 aaPredicted RBP13.94□□□□□ -0.18
VPS45-212ENST00000611412 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 KIAA1755Q5JYT7 1200 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 NOL9Q5SY16 702 aaKnown RBP13.94□□□□□ -0.18
VPS45-212ENST00000611412 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 ANKRD13AQ8IZ07 590 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 FEZ1Q99689 392 aa13.94□□□□□ -0.18
VPS45-212ENST00000611412 SPP2Q13103 211 aa13.93□□□□□ -0.18
VPS45-212ENST00000611412 MAP3K11Q16584 847 aa13.93□□□□□ -0.18
VPS45-212ENST00000611412 STAG2Q8N3U4 1231 aa13.93□□□□□ -0.18
VPS45-212ENST00000611412 C2orf69Q8N8R5 385 aa13.93□□□□□ -0.18
VPS45-212ENST00000611412 SMC1BQ8NDV3 1235 aa13.93□□□□□ -0.18
VPS45-212ENST00000611412 MKL1Q969V6 931 aa13.93□□□□□ -0.18
VPS45-212ENST00000611412 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
VPS45-212ENST00000611412 SH2B1Q9NRF2 756 aaPredicted RBP13.93□□□□□ -0.18
VPS45-212ENST00000611412 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
VPS45-212ENST00000611412 F5H6K3 240 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 DDAH1O94760 285 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 TOMM70O94826 608 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
VPS45-212ENST00000611412 KLRC3Q07444 240 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 MTMR2Q13614 643 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 RTN1Q16799 776 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 SLFN13Q68D06 897 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 IL27Q8NEV9 243 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
VPS45-212ENST00000611412 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
VPS45-212ENST00000611412 TMX2Q9Y320 296 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 NDUFB10O96000 172 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 PDHBP11177 359 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 LDLRAD1Q5T700 205 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 KCTD1Q719H9 257 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
VPS45-212ENST00000611412 PASKQ96RG2 1323 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 JAK2O60674 1132 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
VPS45-212ENST00000611412 CUL4AQ13619 759 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
VPS45-212ENST00000611412 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 CTDNEP1O95476 244 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 CALM1P0DP23 149 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 CALM2P0DP24 149 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 CALM3P0DP25 149 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 GRM4Q14833 912 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 RBM46Q8TBY0 533 aaKnown RBP13.91□□□□□ -0.18
VPS45-212ENST00000611412 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 PHKBQ93100 1093 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 SLC10A4Q96EP9 437 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 AS3MTQ9HBK9 375 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 AFG3L2Q9Y4W6 797 aa13.91□□□□□ -0.18
VPS45-212ENST00000611412 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 CPLX1O14810 134 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 HUNKP57058 714 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 TTBK2Q6IQ55 1244 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 DDX11Q96FC9 970 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 VCPKMTQ9H867 229 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 TRPM7Q96QT4 1865 aa13.9□□□□□ -0.18
VPS45-212ENST00000611412 IRF6O14896 467 aa13.89□□□□□ -0.19
VPS45-212ENST00000611412 PARP1P09874 1014 aaKnown RBP13.89□□□□□ -0.19
VPS45-212ENST00000611412 GJA5P36382 358 aa13.89□□□□□ -0.19
VPS45-212ENST00000611412 SLC1A4P43007 532 aa13.89□□□□□ -0.19
VPS45-212ENST00000611412 HMGCS2P54868 508 aa13.89□□□□□ -0.19
VPS45-212ENST00000611412 FAM83BQ5T0W9 1011 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms