RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 JUNBP17275 347 aaPredicted RBP7.4□□□□□ -1.22
HDDC2-207ENST00000608532 ITGB5P18084 799 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 CLEC16AQ2KHT3 1053 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 CDCP2Q5VXM1 449 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 METTL16Q86W50 562 aaKnown RBP7.4□□□□□ -1.22
HDDC2-207ENST00000608532 ASIC4Q96FT7 647 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 CNNM2Q9H8M5 875 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 SLAMF8Q9P0V8 285 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 DUSP13Q9UII6 198 aa7.4□□□□□ -1.22
HDDC2-207ENST00000608532 NME1P15531 152 aaKnown RBP7.39□□□□□ -1.23
HDDC2-207ENST00000608532 LTKP29376 864 aa7.39□□□□□ -1.23
HDDC2-207ENST00000608532 RNF4P78317 190 aa7.39□□□□□ -1.23
HDDC2-207ENST00000608532 PAK2Q13177 524 aa7.39□□□□□ -1.23
HDDC2-207ENST00000608532 TMPRSS7Q7RTY8 843 aa7.39□□□□□ -1.23
HDDC2-207ENST00000608532 ATG4DQ86TL0 474 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-207ENST00000608532 ZNF512BQ96KM6 892 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-207ENST00000608532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDDC2-207ENST00000608532 ASCC2Q9H1I8 757 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-207ENST00000608532 PPT2Q9UMR5 302 aa7.39□□□□□ -1.23
HDDC2-207ENST00000608532 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.39□□□□□ -1.23
HDDC2-207ENST00000608532 CLEC3AO75596 197 aa7.38□□□□□ -1.23
HDDC2-207ENST00000608532 ESR1P03372 595 aa7.38□□□□□ -1.23
HDDC2-207ENST00000608532 ALPK1Q96QP1 1244 aa7.38□□□□□ -1.23
HDDC2-207ENST00000608532 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
HDDC2-207ENST00000608532 SHISA3A0PJX4 238 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 EGR3Q06889 387 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 CCDC81Q6ZN84 652 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 TTC6Q86TZ1 520 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 TSPYL5Q86VY4 417 aaPredicted RBP7.37□□□□□ -1.23
HDDC2-207ENST00000608532 FAM168AQ92567 244 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 ZNRF3Q9ULT6 936 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 CTNND2Q9UQB3 1225 aa7.37□□□□□ -1.23
HDDC2-207ENST00000608532 SRFP11831 508 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 IMPDH2P12268 514 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 HK2P52789 917 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 NMIQ13287 307 aaPredicted RBP7.36□□□□□ -1.23
HDDC2-207ENST00000608532 GAB4Q2WGN9 574 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 NBPF12Q5TAG4 269 aaPredicted RBP7.36□□□□□ -1.23
HDDC2-207ENST00000608532 ZNF428Q96B54 188 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 SLC6A18Q96N87 628 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 SLC9A7Q96T83 725 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 MKRN2Q9H000 416 aaKnown RBP7.36□□□□□ -1.23
HDDC2-207ENST00000608532 GINM1Q9NU53 330 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 EFR3BQ9Y2G0 817 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 PCDHA11Q9Y5I1 949 aa7.36□□□□□ -1.23
HDDC2-207ENST00000608532 DNAJC25-GNG10A0A024R161 153 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 MEIS3P2A8K0S8 358 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 AFMP43652 599 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 RALGPS1Q5JS13 557 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 TMEM192Q8IY95 271 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 FLAD1Q8NFF5 587 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 GPRASP2Q96D09 838 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 VWCEQ96DN2 955 aa7.35□□□□□ -1.23
HDDC2-207ENST00000608532 TNFRSF10CO14798 259 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 CCNFP41002 786 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 TXKP42681 527 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 SNW1Q13573 536 aaKnown RBP7.34□□□□□ -1.23
HDDC2-207ENST00000608532 KCNMB1Q16558 191 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 NBPF9Q3BBW0 867 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 FYB2Q5VWT5 728 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 RUFY4Q6ZNE9 571 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 TMC3Q7Z5M5 1100 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 SYTL4Q96C24 671 aaPredicted RBP7.34□□□□□ -1.23
HDDC2-207ENST00000608532 CCDC120Q96HB5 630 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 CRBNQ96SW2 442 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 ADAMTS10Q9H324 1103 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 CCSER2Q9H7U1 834 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 FBXL21Q9UKT6 434 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 CARMIL2Q6F5E8 1435 aa7.34□□□□□ -1.23
HDDC2-207ENST00000608532 GDNFP39905 211 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 ZSWIM9Q86XI8 627 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 KIRREL1Q96J84 757 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 PODXL2Q9NZ53 605 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 TMEM59LQ9UK28 342 aa7.33□□□□□ -1.24
HDDC2-207ENST00000608532 SSU72P8A0A1W2PR75 194 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 MEIS1O00470 390 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 ACRP10323 421 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 RAC2P15153 192 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 RBM25P49756 843 aaKnown RBP7.32□□□□□ -1.24
HDDC2-207ENST00000608532 DHRS1Q96LJ7 313 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 PRDM14Q9GZV8 571 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 FAM86C1Q9NVL1 165 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 INPP5FQ9Y2H2 1132 aa7.32□□□□□ -1.24
HDDC2-207ENST00000608532 NASPP49321 788 aaPredicted RBP7.31□□□□□ -1.24
HDDC2-207ENST00000608532 ERVFC1P60507 584 aa7.31□□□□□ -1.24
HDDC2-207ENST00000608532 TDRD10Q5VZ19 366 aaKnown RBP7.31□□□□□ -1.24
HDDC2-207ENST00000608532 CCDC144CPQ8IYA2 1237 aa7.31□□□□□ -1.24
HDDC2-207ENST00000608532 CPLX3Q8WVH0 158 aa7.31□□□□□ -1.24
HDDC2-207ENST00000608532 SPATA32Q96LK8 384 aa7.31□□□□□ -1.24
HDDC2-207ENST00000608532 TM9SF2Q99805 663 aa7.31□□□□□ -1.24
HDDC2-207ENST00000608532 MINPP1Q9UNW1 487 aa7.31□□□□□ -1.24
HDDC2-207ENST00000608532 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.31□□□□□ -1.24
HDDC2-207ENST00000608532 PRAMEF1O95521 474 aa7.3□□□□□ -1.24
HDDC2-207ENST00000608532 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
HDDC2-207ENST00000608532 EIF6P56537 245 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms