RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ERVK-24P63145 666 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 GPRC5AQ8NFJ5 357 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 COA7Q96BR5 231 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 CCDC17Q96LX7 622 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 ARHGEF10LQ9HCE6 1279 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 MYH4Q9Y623 1939 aa14.7□□□□□ -0.06
CTSA-210ENST00000606000 BRCA2P51587 3418 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
CTSA-210ENST00000606000 TNRC18O15417 2968 aaPredicted RBP14.69□□□□□ -0.06
CTSA-210ENST00000606000 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 SLAIN1Q8ND83 568 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 TMEM106CQ9BVX2 250 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
CTSA-210ENST00000606000 BIN2Q9UBW5 565 aaPredicted RBP14.69□□□□□ -0.06
CTSA-210ENST00000606000 GJD2Q9UKL4 321 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 TMX2Q9Y320 296 aa14.69□□□□□ -0.06
CTSA-210ENST00000606000 INHAP05111 366 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 CCL5P13501 91 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 PPARAQ07869 468 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 TRIM32Q13049 653 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 NMIQ13287 307 aaPredicted RBP14.68□□□□□ -0.06
CTSA-210ENST00000606000 IRF5Q13568 498 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
CTSA-210ENST00000606000 ZNF589Q86UQ0 364 aaPredicted RBP14.68□□□□□ -0.06
CTSA-210ENST00000606000 NAPBQ9H115 298 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 UNC93B1Q9H1C4 597 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 VCPKMTQ9H867 229 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 MKNK2Q9HBH9 465 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 INCENPQ9NQS7 918 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 TACC3Q9Y6A5 838 aa14.68□□□□□ -0.06
CTSA-210ENST00000606000 RAD21O60216 631 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 CYP2B6P20813 491 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 PDE4AP27815 886 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 CTDSPL2Q05D32 466 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 GPR142Q7Z601 462 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 GTF3C2Q8WUA4 911 aaPredicted RBP14.67□□□□□ -0.06
CTSA-210ENST00000606000 NACAP1Q9BZK3 213 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 KANSL2Q9H9L4 492 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 RABGAP1Q9Y3P9 1069 aa14.67□□□□□ -0.06
CTSA-210ENST00000606000 IGKV6D-41A0A0C4DH26 115 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 UBXN2AP68543 259 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 FAM47AQ5JRC9 791 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 LBX2Q6XYB7 198 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 PXYLP1Q8TE99 480 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 TRIB2Q92519 343 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 ATG4CQ96DT6 458 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 NUP88Q99567 741 aaPredicted RBP14.66□□□□□ -0.06
CTSA-210ENST00000606000 RNF208Q9H0X6 261 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 OSBPL3Q9H4L5 887 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 SH2D4AQ9H788 454 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 FBXO28Q9NVF7 368 aa14.66□□□□□ -0.06
CTSA-210ENST00000606000 WDR46O15213 610 aaKnown RBP14.65□□□□□ -0.06
CTSA-210ENST00000606000 FLOT1O75955 427 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 MAPK4P31152 587 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 COG2Q14746 738 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 CCL14Q16627 93 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 FAM83BQ5T0W9 1011 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 WDR78Q5VTH9 848 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 LRRC47Q8N1G4 583 aaKnown RBP14.65□□□□□ -0.06
CTSA-210ENST00000606000 LPAR1Q92633 364 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 CEP95Q96GE4 821 aa14.65□□□□□ -0.06
CTSA-210ENST00000606000 LAMA4Q16363 1823 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 SDSP20132 328 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 DSG3P32926 999 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 MCMDC2Q4G0Z9 681 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 MORN1Q5T089 497 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 PLEKHH3Q7Z736 793 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 CCAR1Q8IX12 1150 aaKnown RBP14.64□□□□□ -0.07
CTSA-210ENST00000606000 ZNF444Q8N0Y2 327 aaPredicted RBP14.64□□□□□ -0.07
CTSA-210ENST00000606000 USP6NLQ92738 828 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 NUDT12Q9BQG2 462 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.64□□□□□ -0.07
CTSA-210ENST00000606000 ZNF236Q9UL36 1845 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
CTSA-210ENST00000606000 GSPT1P15170 499 aaKnown RBP14.63□□□□□ -0.07
CTSA-210ENST00000606000 TFAP4Q01664 338 aa14.63□□□□□ -0.07
CTSA-210ENST00000606000 SOCS4Q8WXH5 440 aa14.63□□□□□ -0.07
CTSA-210ENST00000606000 CHMP4CQ96CF2 233 aa14.63□□□□□ -0.07
CTSA-210ENST00000606000 MOV10L1Q9BXT6 1211 aaKnown RBP14.63□□□□□ -0.07
CTSA-210ENST00000606000 CWC22Q9HCG8 908 aaKnown RBP14.63□□□□□ -0.07
CTSA-210ENST00000606000 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
CTSA-210ENST00000606000 NYAP2Q9P242 653 aa14.63□□□□□ -0.07
CTSA-210ENST00000606000 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
CTSA-210ENST00000606000 FRMPD3Q5JV73 1810 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 NMT2O60551 498 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 NDUFB10O96000 172 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 HMGCRP04035 888 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 GJB1P08034 283 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 TSPY3P0CV98 308 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 TSPY8P0CW00 308 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
CTSA-210ENST00000606000 GJA8P48165 433 aa14.62□□□□□ -0.07
CTSA-210ENST00000606000 HAND2P61296 217 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms