RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MPHOSPH10O00566 681 aaKnown RBP21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 GLRX3O76003 335 aaKnown RBP21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 MBD4O95243 580 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 COG2Q14746 738 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 C20orf194Q5TEA3 1177 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 TMEM179Q6ZVK1 233 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 NPLOC4Q8TAT6 608 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 HOXC10Q9NYD6 342 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 RCAN3Q9UKA8 241 aa21.74■■□□□ 1.07
CHMP2A-208ENST00000601220 AKR1B1P15121 316 aa21.73■■□□□ 1.07
CHMP2A-208ENST00000601220 UBE3CQ15386 1083 aa21.73■■□□□ 1.07
CHMP2A-208ENST00000601220 C12orf60Q5U649 245 aa21.73■■□□□ 1.07
CHMP2A-208ENST00000601220 MOV10L1Q9BXT6 1211 aaKnown RBP21.73■■□□□ 1.07
CHMP2A-208ENST00000601220 BCL11AQ9H165 835 aa21.73■■□□□ 1.07
CHMP2A-208ENST00000601220 NAV1Q8NEY1 1877 aa21.73■■□□□ 1.07
CHMP2A-208ENST00000601220 CYP2D7A0A087X1C5 515 aa21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 WDR78Q5VTH9 848 aa21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 CLEC10AQ8IUN9 316 aa21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 TRPV1Q8NER1 839 aa21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 CHMP4BQ9H444 224 aaKnown RBP21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 CWC22Q9HCG8 908 aaKnown RBP21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 TMX2Q9Y320 296 aa21.72■■□□□ 1.07
CHMP2A-208ENST00000601220 SYN1P17600 705 aa21.71■■□□□ 1.07
CHMP2A-208ENST00000601220 DSG3P32926 999 aa21.71■■□□□ 1.07
CHMP2A-208ENST00000601220 CDK8P49336 464 aa21.71■■□□□ 1.07
CHMP2A-208ENST00000601220 MFSD14CQ5VZR4 134 aa21.71■■□□□ 1.07
CHMP2A-208ENST00000601220 LRCH3Q96II8 777 aa21.71■■□□□ 1.07
CHMP2A-208ENST00000601220 USP17L12C9JPN9 530 aa21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 USP17L21D6R901 530 aa21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 SMARCA5O60264 1052 aaPredicted RBP21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 LRRC26Q2I0M4 334 aa21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 SHCBP1Q8NEM2 672 aa21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 LPAR1Q92633 364 aa21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.7■■□□□ 1.063e-6■□□□□ 8.5
CHMP2A-208ENST00000601220 SPATC1LQ9H0A9 340 aa21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 PUS7LQ9H0K6 701 aaKnown RBP21.7■■□□□ 1.06
CHMP2A-208ENST00000601220 ERCC3P19447 782 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 CYP2C19P33261 490 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 MAGEA10P43363 369 aaPredicted RBP21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 ATP2B2Q01814 1243 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 C16orf86Q6ZW13 317 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 CCDC17Q96LX7 622 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 TANGO6Q9C0B7 1094 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 VCPKMTQ9H867 229 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 DDX20Q9UHI6 824 aaKnown RBP21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 IVNS1ABPQ9Y6Y0 642 aa21.69■■□□□ 1.06
CHMP2A-208ENST00000601220 RLFQ13129 1914 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 STRNO43815 780 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 COBLO75128 1261 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 ADORA2AP29274 412 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 ICA1Q05084 483 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 SPICE1Q8N0Z3 855 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 MB21D1Q8N884 522 aa21.68■■□□□ 1.06
CHMP2A-208ENST00000601220 CYBAP13498 195 aa21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 OLFML2BQ68BL8 750 aa21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 ATG4CQ96DT6 458 aa21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 ARHGEF10LQ9HCE6 1279 aa21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 ADAMTS5Q9UNA0 930 aa21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 SLC4A4Q9Y6R1 1079 aa21.67■■□□□ 1.06
CHMP2A-208ENST00000601220 FLOT1O75955 427 aa21.66■■□□□ 1.06
CHMP2A-208ENST00000601220 DPP9Q86TI2 863 aa21.66■■□□□ 1.06
CHMP2A-208ENST00000601220 A0A0G2JMZ2 1700 aa21.66■■□□□ 1.06
CHMP2A-208ENST00000601220 WDR46O15213 610 aaKnown RBP21.65■■□□□ 1.06
CHMP2A-208ENST00000601220 MSCO60682 206 aa21.65■■□□□ 1.06
CHMP2A-208ENST00000601220 EEF2P13639 858 aaKnown RBP21.65■■□□□ 1.06
CHMP2A-208ENST00000601220 ZSCAN25Q6NSZ9 544 aa21.65■■□□□ 1.06
CHMP2A-208ENST00000601220 STRBPQ96SI9 672 aaKnown RBP21.65■■□□□ 1.06
CHMP2A-208ENST00000601220 MROH8Q9H579 483 aa21.65■■□□□ 1.06
CHMP2A-208ENST00000601220 CNGA1P29973 690 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 TMEM132BQ14DG7 1078 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 LRIT3Q3SXY7 679 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 ABRAQ8N0Z2 381 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 SENP6Q9GZR1 1112 aaPredicted RBP21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 DCTPP1Q9H773 170 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 SH2D4AQ9H788 454 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 KANSL2Q9H9L4 492 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 ECHDC1Q9NTX5 307 aa21.64■■□□□ 1.05
CHMP2A-208ENST00000601220 GSG1L2A8MUP6 293 aa21.63■■□□□ 1.05
CHMP2A-208ENST00000601220 ZNF236Q9UL36 1845 aa21.63■■□□□ 1.05
CHMP2A-208ENST00000601220 DNM1LO00429 736 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 PLS1Q14651 629 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 SBK1Q52WX2 424 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 GPR153Q6NV75 609 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 NCAPG2Q86XI2 1143 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 AMOTL1Q8IY63 956 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 TDHQ8IZJ6 230 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 OSBP2Q969R2 916 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 FBXO28Q9NVF7 368 aa21.62■■□□□ 1.05
CHMP2A-208ENST00000601220 PRAMEF19Q5SWL8 479 aa21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 KBTBD3Q8NAB2 608 aa21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 REPS2Q8NFH8 660 aa21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 DDRGK1Q96HY6 314 aa21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 UBE2OQ9C0C9 1292 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 ARPP21Q9UBL0 812 aaPredicted RBP21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 BAZ2AQ9UIF9 1905 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-208ENST00000601220 SEPT4O43236 478 aa21.6■■□□□ 1.05
CHMP2A-208ENST00000601220 RASA1P20936 1047 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms