RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 PDHXO00330 501 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 PEX10O60683 326 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 TRPA1O75762 1119 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 TBC1D8O95759 1140 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 CYP2C8P10632 490 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 VCAM1P19320 739 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 INHBEP58166 350 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
FARP1-230ENST00000600380 KLRC3Q07444 240 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 SREBF2Q12772 1141 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 FASTKD5Q7L8L6 764 aaKnown RBP13.95□□□□□ -0.18
FARP1-230ENST00000600380 ANKRD23Q86SG2 305 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 PROCA1Q8NCQ7 364 aaPredicted RBP13.95□□□□□ -0.18
FARP1-230ENST00000600380 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 ARHGEF10LQ9HCE6 1279 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 AGTPBP1Q9UPW5 1226 aa13.95□□□□□ -0.18
FARP1-230ENST00000600380 TNKSO95271 1327 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 EPB41L2O43491 1005 aaKnown RBP13.94□□□□□ -0.18
FARP1-230ENST00000600380 PRC1O43663 620 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 TRDNQ13061 729 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 JAKMIP1Q96N16 626 aaKnown RBP13.94□□□□□ -0.18
FARP1-230ENST00000600380 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 P2RX7Q99572 595 aaKnown RBP13.94□□□□□ -0.18
FARP1-230ENST00000600380 TMOD4Q9NZQ9 345 aa13.94□□□□□ -0.18
FARP1-230ENST00000600380 TOP1P11387 765 aaKnown RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 ZKSCAN1P17029 563 aaPredicted RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 CRHR2Q13324 411 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 FAM83BQ5T0W9 1011 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 SLFN13Q68D06 897 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
FARP1-230ENST00000600380 FBXO28Q9NVF7 368 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 MYH4Q9Y623 1939 aa13.93□□□□□ -0.18
FARP1-230ENST00000600380 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
FARP1-230ENST00000600380 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
FARP1-230ENST00000600380 FOXN1O15353 648 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 RAD21O60216 631 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 MCCP23508 829 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
FARP1-230ENST00000600380 USP14P54578 494 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 CAP1Q01518 475 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 CATSPERGQ6ZRH7 1159 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 GMCL1P1Q8NEA9 526 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 TTC14Q96N46 770 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 LY9Q9HBG7 655 aa13.92□□□□□ -0.18
FARP1-230ENST00000600380 CA12O43570 354 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
FARP1-230ENST00000600380 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
FARP1-230ENST00000600380 MCM5P33992 734 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 KRT32Q14532 448 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 TAF1CQ15572 869 aaPredicted RBP13.91□□□□□ -0.18
FARP1-230ENST00000600380 TMEM67Q5HYA8 995 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 TTBK2Q6IQ55 1244 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
FARP1-230ENST00000600380 IQCA1Q86XH1 822 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 KIF2CQ99661 725 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
FARP1-230ENST00000600380 SH2D4AQ9H788 454 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 ZSWIM6Q9HCJ5 1215 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 RLFQ13129 1914 aa13.91□□□□□ -0.18
FARP1-230ENST00000600380 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 CASTP20810 708 aaKnown RBP13.9□□□□□ -0.18
FARP1-230ENST00000600380 RPS6KB1P23443 525 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 NT5C2P49902 561 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 KCTD1Q719H9 257 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 LPAR1Q92633 364 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 GMCL1Q96IK5 515 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 GOPCQ9HD26 462 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 ZCCHC17Q9NP64 241 aaKnown RBP13.9□□□□□ -0.18
FARP1-230ENST00000600380 CPA4Q9UI42 421 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 SYNPO2Q9UMS6 1093 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 SLC45A1Q9Y2W3 748 aa13.9□□□□□ -0.18
FARP1-230ENST00000600380 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
FARP1-230ENST00000600380 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
FARP1-230ENST00000600380 CNMDO75829 334 aa13.89□□□□□ -0.19
FARP1-230ENST00000600380 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
FARP1-230ENST00000600380 HSPA8P11142 646 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms