RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SDSP20132 328 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 GRK4P32298 578 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 ERVK-9P63128 1117 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 ERVK-24P63145 666 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 PPARAQ07869 468 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 LBX2Q6XYB7 198 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 COA7Q96BR5 231 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 VCPKMTQ9H867 229 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 GREB1LQ9C091 1923 aaPredicted RBP22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 IRF5Q13568 498 aa22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 ALX1Q15699 326 aa22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 ZNF589Q86UQ0 364 aaPredicted RBP22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 LPAR1Q92633 364 aa22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 PAGR1Q9BTK6 254 aa22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 RABGAP1Q9Y3P9 1069 aa22.04■■□□□ 1.12
SHKBP1-202ENST00000593764 IGKV6D-41A0A0C4DH26 115 aa22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 SPDYE16A6NNV3 312 aaPredicted RBP22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 ATP2B2Q01814 1243 aa22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 ZNF444Q8N0Y2 327 aaPredicted RBP22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 SPICE1Q8N0Z3 855 aa22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 PORCNQ9H237 461 aa22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 SH2D4AQ9H788 454 aa22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 ZNF287Q9HBT7 754 aa22.03■■□□□ 1.12
SHKBP1-202ENST00000593764 ADCY3O60266 1144 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 MYCP01106 439 aaPredicted RBP22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 COG2Q14746 738 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 MTFR1Q15390 333 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 SLAIN1Q8ND83 568 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 BTBD7Q9P203 1132 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 NYAP2Q9P242 653 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 TACC3Q9Y6A5 838 aa22.02■■□□□ 1.12
SHKBP1-202ENST00000593764 FGAP02671 866 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 HSPD1P10809 573 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 ELNP15502 786 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 CTDSPL2Q05D32 466 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 PDE4BQ07343 736 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 PXYLP1Q8TE99 480 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 TANGO6Q9C0B7 1094 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 INCENPQ9NQS7 918 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 HOXC10Q9NYD6 342 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 ANAPC4Q9UJX5 808 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 RLFQ13129 1914 aa22.01■■□□□ 1.11
SHKBP1-202ENST00000593764 WDR46O15213 610 aaKnown RBP22■■□□□ 1.11
SHKBP1-202ENST00000593764 SLC3A2P08195 630 aaKnown RBP22■■□□□ 1.11
SHKBP1-202ENST00000593764 EN2P19622 333 aaPredicted RBP22■■□□□ 1.11
SHKBP1-202ENST00000593764 MAPK4P31152 587 aa22■■□□□ 1.11
SHKBP1-202ENST00000593764 TMEM106CQ9BVX2 250 aa22■■□□□ 1.11
SHKBP1-202ENST00000593764 CCDC171Q6TFL3 1326 aa22■■□□□ 1.11
SHKBP1-202ENST00000593764 GSPT1P15170 499 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 DSG3P32926 999 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 FAM47AQ5JRC9 791 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 NEDD1Q8NHV4 660 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 CEP95Q96GE4 821 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 GOPCQ9HD26 462 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 MTMR4Q9NYA4 1195 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 CLIP2Q9UDT6 1046 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 RBBP6Q7Z6E9 1792 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 PLXNB2O15031 1838 aa21.99■■□□□ 1.11
SHKBP1-202ENST00000593764 FGRP09769 529 aa21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 TFAP4Q01664 338 aa21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 GPR142Q7Z601 462 aa21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 USP6NLQ92738 828 aa21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 MKL1Q969V6 931 aa21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 BIN2Q9UBW5 565 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 PLIN4Q96Q06 1357 aa21.98■■□□□ 1.11
SHKBP1-202ENST00000593764 FLOT1O75955 427 aa21.97■■□□□ 1.11
SHKBP1-202ENST00000593764 MORN1Q5T089 497 aa21.97■■□□□ 1.11
SHKBP1-202ENST00000593764 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
SHKBP1-202ENST00000593764 CWC27Q6UX04 472 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-202ENST00000593764 ZMYM6O95789 1325 aa21.97■■□□□ 1.11
SHKBP1-202ENST00000593764 F5H6K3 240 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 TSPY3P0CV98 308 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 TSPY8P0CW00 308 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 CCL5P13501 91 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 UBXN2AP68543 259 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 CCNA1P78396 465 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 KLRC3Q07444 240 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 PLEKHH3Q7Z736 793 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 ATG4CQ96DT6 458 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 NUDT12Q9BQG2 462 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 DIAPH3Q9NSV4 1193 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 FBXO28Q9NVF7 368 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 ADAMTS5Q9UNA0 930 aa21.96■■□□□ 1.11
SHKBP1-202ENST00000593764 HIP1O00291 1037 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 TTLL1O95922 423 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 NDUFB10O96000 172 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 INHAP05111 366 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 MFAP1P55081 439 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 FAM83BQ5T0W9 1011 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 CCAR1Q8IX12 1150 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 MB21D1Q8N884 522 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 SOCS4Q8WXH5 440 aa21.95■■□□□ 1.1
SHKBP1-202ENST00000593764 PDE4DIPQ5VU43 2346 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 ORC4O43929 436 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 RAD21O60216 631 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 XRCC5P13010 732 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 CYP2B6P20813 491 aa21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 NUP88Q99567 741 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-202ENST00000593764 MOV10L1Q9BXT6 1211 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms