RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 NEK1Q96PY6 1258 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 BEGAINQ9BUH8 593 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 VCPKMTQ9H867 229 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 SYNPO2Q9UMS6 1093 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 AGTPBP1Q9UPW5 1226 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 RAD21O60216 631 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 ALDH1A1P00352 501 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 TOP1P11387 765 aaKnown RBP22.52■■□□□ 1.2
DDX39A-214ENST00000590556 MCM5P33992 734 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 ADCK5Q3MIX3 580 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 TREML2Q5T2D2 321 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 DGKHQ86XP1 1220 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 LRRC47Q8N1G4 583 aaKnown RBP22.52■■□□□ 1.2
DDX39A-214ENST00000590556 TNKSO95271 1327 aa22.52■■□□□ 1.2
DDX39A-214ENST00000590556 PDHXO00330 501 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 IFIT3O14879 490 aaKnown RBP22.51■■□□□ 1.19
DDX39A-214ENST00000590556 VCAM1P19320 739 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 PABPC4Q13310 644 aaKnown RBP eCLIP22.51■■□□□ 1.19
DDX39A-214ENST00000590556 SART3Q15020 963 aaKnown RBP22.51■■□□□ 1.19
DDX39A-214ENST00000590556 KIAA1755Q5JYT7 1200 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 RCSD1Q6JBY9 416 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 CHST3Q7LGC8 479 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 ENAHQ8N8S7 591 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-214ENST00000590556 LPAR1Q92633 364 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 TMEM47Q9BQJ4 181 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 ZCCHC17Q9NP64 241 aaKnown RBP22.51■■□□□ 1.19
DDX39A-214ENST00000590556 WBP1LQ9NX94 342 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 RNF186Q9NXI6 227 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 SLC45A1Q9Y2W3 748 aa22.51■■□□□ 1.19
DDX39A-214ENST00000590556 ERICH2A1L162 156 aa22.5■■□□□ 1.19
DDX39A-214ENST00000590556 F5H6K3 240 aa22.5■■□□□ 1.19
DDX39A-214ENST00000590556 PRC1O43663 620 aa22.5■■□□□ 1.19
DDX39A-214ENST00000590556 ANTXR2P58335 489 aa22.5■■□□□ 1.19
DDX39A-214ENST00000590556 KLRC3Q07444 240 aa22.5■■□□□ 1.19
DDX39A-214ENST00000590556 ANKS1AQ92625 1134 aa22.5■■□□□ 1.19
DDX39A-214ENST00000590556 JAKMIP1Q96N16 626 aaKnown RBP22.5■■□□□ 1.19
DDX39A-214ENST00000590556 TRPA1O75762 1119 aa22.49■■□□□ 1.19
DDX39A-214ENST00000590556 HMGB1P09429 215 aaKnown RBP22.49■■□□□ 1.19
DDX39A-214ENST00000590556 PSMA5P28066 241 aa22.49■■□□□ 1.19
DDX39A-214ENST00000590556 GMCL1P1Q8NEA9 526 aa22.49■■□□□ 1.19
DDX39A-214ENST00000590556 RPAP3Q9H6T3 665 aaPredicted RBP22.49■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L15C9J2P7 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L13C9JLJ4 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L11C9JVI0 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L18D6R9N7 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L22D6RA61 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L17D6RBQ6 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L19D6RCP7 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L20D6RJB6 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 NDUFB10O96000 172 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 HOXA7P31268 230 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-214ENST00000590556 USP17L24Q0WX57 530 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 COL9A3Q14050 684 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-214ENST00000590556 SEC23AQ15436 765 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 TAF1CQ15572 869 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-214ENST00000590556 TMEM67Q5HYA8 995 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 IFIT1BQ5T764 474 aaKnown RBP22.48■■□□□ 1.19
DDX39A-214ENST00000590556 SLFN13Q68D06 897 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 DHX32Q7L7V1 743 aaKnown RBP22.48■■□□□ 1.19
DDX39A-214ENST00000590556 KAT14Q9H8E8 782 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 PNMA3Q9UL41 463 aa22.48■■□□□ 1.19
DDX39A-214ENST00000590556 WDR46O15213 610 aaKnown RBP22.47■■□□□ 1.19
DDX39A-214ENST00000590556 CA12O43570 354 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 OSBPP22059 807 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 WTAPQ15007 396 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 TMEM87BQ96K49 555 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 MTA3Q9BTC8 594 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 TANGO6Q9C0B7 1094 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 SAGE1Q9NXZ1 904 aa22.47■■□□□ 1.19
DDX39A-214ENST00000590556 ANAPC15P60006 121 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 IRX3P78415 501 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-214ENST00000590556 EXOSC10Q01780 885 aaKnown RBP22.46■■□□□ 1.19
DDX39A-214ENST00000590556 FAM83BQ5T0W9 1011 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 BLOC1S2Q6QNY1 142 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 CATSPERGQ6ZRH7 1159 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 IGDCC4Q8TDY8 1250 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 PARK7Q99497 189 aaKnown RBP22.46■■□□□ 1.19
DDX39A-214ENST00000590556 ASCC2Q9H1I8 757 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-214ENST00000590556 ZFYVE28Q9HCC9 887 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 MTMR7Q9Y216 660 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 WDR19Q8NEZ3 1342 aa22.46■■□□□ 1.19
DDX39A-214ENST00000590556 TBC1D8O95759 1140 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 CYP2C8P10632 490 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 CASTP20810 708 aaKnown RBP22.45■■□□□ 1.18
DDX39A-214ENST00000590556 CRHR2Q13324 411 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 PNMA1Q8ND90 353 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 CHMP4CQ96CF2 233 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 GMCL1Q96IK5 515 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-214ENST00000590556 LRRC2Q9BYS8 371 aa22.45■■□□□ 1.18
DDX39A-214ENST00000590556 UPF2Q9HAU5 1272 aaKnown RBP22.45■■□□□ 1.18
DDX39A-214ENST00000590556 SH2B2O14492 632 aaPredicted RBP22.44■■□□□ 1.18
DDX39A-214ENST00000590556 CPA1P15085 419 aa22.44■■□□□ 1.18
DDX39A-214ENST00000590556 SLC1A4P43007 532 aa22.44■■□□□ 1.18
DDX39A-214ENST00000590556 TCEANC2Q96MN5 208 aa22.44■■□□□ 1.18
DDX39A-214ENST00000590556 P2RX7Q99572 595 aaKnown RBP22.44■■□□□ 1.18
DDX39A-214ENST00000590556 CFHR5Q9BXR6 569 aa22.44■■□□□ 1.18
DDX39A-214ENST00000590556 BACH2Q9BYV9 841 aa22.44■■□□□ 1.18
DDX39A-214ENST00000590556 TM6SF1Q9BZW5 370 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms