RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FOSL2P15408 326 aa21.13■□□□□ 0.97
RETREG3-210ENST00000590541 ADCYAP1R1P41586 468 aa21.13■□□□□ 0.97
RETREG3-210ENST00000590541 C1orf53Q5VUE5 145 aa21.13■□□□□ 0.97
RETREG3-210ENST00000590541 CABP5Q9NP86 173 aa21.13■□□□□ 0.97
RETREG3-210ENST00000590541 MYCNP04198 464 aaPredicted RBP21.12■□□□□ 0.97
RETREG3-210ENST00000590541 TRIM27P14373 513 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 ERCC3P19447 782 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 ITGB8P26012 769 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 PLCD1P51178 756 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 POLA2Q14181 598 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 LRRC41Q15345 812 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 PRAMEF19Q5SWL8 479 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 TTC6Q86TZ1 520 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 FERMT2Q96AC1 680 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 SPATC1LQ9H0A9 340 aa21.12■□□□□ 0.97
RETREG3-210ENST00000590541 A0A1W2PRG0 241 aa21.11■□□□□ 0.97
RETREG3-210ENST00000590541 IDH1O75874 414 aaKnown RBP21.11■□□□□ 0.97
RETREG3-210ENST00000590541 COG2Q14746 738 aa21.11■□□□□ 0.97
RETREG3-210ENST00000590541 CERS3Q8IU89 383 aa21.11■□□□□ 0.97
RETREG3-210ENST00000590541 SHCBP1Q8NEM2 672 aa21.11■□□□□ 0.97
RETREG3-210ENST00000590541 TLR7Q9NYK1 1049 aaKnown RBP21.11■□□□□ 0.97
RETREG3-210ENST00000590541 DBNLQ9UJU6 430 aaKnown RBP21.11■□□□□ 0.97
RETREG3-210ENST00000590541 A0A0G2JMZ2 1700 aa21.11■□□□□ 0.97
RETREG3-210ENST00000590541 TMEM265A0A087WTH1 108 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 EPHB4P54760 987 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 TLE2Q04725 743 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 SEPT2Q15019 361 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 FAM47AQ5JRC9 791 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 MAGEB6Q8N7X4 407 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 SYMPKQ92797 1274 aaKnown RBP21.1■□□□□ 0.97
RETREG3-210ENST00000590541 HOXC10Q9NYD6 342 aa21.1■□□□□ 0.97
RETREG3-210ENST00000590541 ZBED9Q6R2W3 1325 aa21.09■□□□□ 0.97
RETREG3-210ENST00000590541 GABPAQ06546 454 aa21.09■□□□□ 0.97
RETREG3-210ENST00000590541 OS9Q13438 667 aaPredicted RBP21.09■□□□□ 0.97
RETREG3-210ENST00000590541 SSH3Q8TE77 659 aa21.09■□□□□ 0.97
RETREG3-210ENST00000590541 FRAT1Q92837 279 aaPredicted RBP21.09■□□□□ 0.97
RETREG3-210ENST00000590541 BCAR3O75815 825 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 KIAA1755Q5JYT7 1200 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 ZKSCAN2Q63HK3 967 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 MAML3Q96JK9 1138 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 RNPC3Q96LT9 517 aaKnown RBP21.08■□□□□ 0.97
RETREG3-210ENST00000590541 CCDC8Q9H0W5 538 aaPredicted RBP21.08■□□□□ 0.97
RETREG3-210ENST00000590541 ANTXR1Q9H6X2 564 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 PHF24Q9UPV7 400 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 TACC3Q9Y6A5 838 aa21.08■□□□□ 0.97
RETREG3-210ENST00000590541 SURF6O75683 361 aaKnown RBP21.07■□□□□ 0.96
RETREG3-210ENST00000590541 EVX2Q03828 476 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 ABRAQ8N0Z2 381 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 USP38Q8NB14 1042 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 CLUAP1Q96AJ1 413 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 RIOK1Q9BRS2 568 aaKnown RBP21.07■□□□□ 0.96
RETREG3-210ENST00000590541 TANGO6Q9C0B7 1094 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 MROH8Q9H579 483 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 SLC5A4Q9NY91 659 aa21.07■□□□□ 0.96
RETREG3-210ENST00000590541 CLTBP09497 229 aa21.06■□□□□ 0.96
RETREG3-210ENST00000590541 DSG3P32926 999 aa21.06■□□□□ 0.96
RETREG3-210ENST00000590541 ATP8B2P98198 1209 aa21.06■□□□□ 0.96
RETREG3-210ENST00000590541 GRIN2CQ14957 1233 aa21.06■□□□□ 0.96
RETREG3-210ENST00000590541 MB21D1Q8N884 522 aa21.06■□□□□ 0.96
RETREG3-210ENST00000590541 EAF2Q96CJ1 260 aaPredicted RBP21.06■□□□□ 0.96
RETREG3-210ENST00000590541 KIAA0355O15063 1070 aa21.05■□□□□ 0.96
RETREG3-210ENST00000590541 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
RETREG3-210ENST00000590541 XPNPEP3Q9NQH7 507 aa21.05■□□□□ 0.96
RETREG3-210ENST00000590541 MUC3AQ02505 3323 aa21.04■□□□□ 0.96
RETREG3-210ENST00000590541 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
RETREG3-210ENST00000590541 POLR3DP05423 398 aaPredicted RBP21.04■□□□□ 0.96
RETREG3-210ENST00000590541 PLS1Q14651 629 aa21.04■□□□□ 0.96
RETREG3-210ENST00000590541 TJAP1Q5JTD0 557 aa21.04■□□□□ 0.96
RETREG3-210ENST00000590541 ATG4CQ96DT6 458 aa21.04■□□□□ 0.96
RETREG3-210ENST00000590541 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
RETREG3-210ENST00000590541 PGK1P00558 417 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 RARBP10826 455 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 RAG1P15918 1043 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 DNAJB2P25686 324 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 MAP3K12Q12852 859 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 TMED8Q6PL24 325 aaPredicted RBP21.03■□□□□ 0.96
RETREG3-210ENST00000590541 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 NRBP1Q9UHY1 535 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 TTC28Q96AY4 2481 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 NAV1Q8NEY1 1877 aa21.03■□□□□ 0.96
RETREG3-210ENST00000590541 SMCHD1A6NHR9 2005 aa21.02■□□□□ 0.96
RETREG3-210ENST00000590541 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.02■□□□□ 0.96
RETREG3-210ENST00000590541 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.02■□□□□ 0.96
RETREG3-210ENST00000590541 A0A1W2PQ45 241 aaPredicted RBP21.02■□□□□ 0.96
RETREG3-210ENST00000590541 A0A1W2PQY0 241 aa21.02■□□□□ 0.96
RETREG3-210ENST00000590541 PQBP1O60828 265 aaKnown RBP21.02■□□□□ 0.96
RETREG3-210ENST00000590541 FLOT1O75955 427 aa21.02■□□□□ 0.96
RETREG3-210ENST00000590541 FCER1AP12319 257 aa21.02■□□□□ 0.96
RETREG3-210ENST00000590541 FPGSQ05932 587 aa21.02■□□□□ 0.96
RETREG3-210ENST00000590541 SIAH1Q8IUQ4 282 aa21.02■□□□□ 0.96
RETREG3-210ENST00000590541 TNFRSF10AO00220 468 aa21.01■□□□□ 0.95
RETREG3-210ENST00000590541 TAL1P17542 331 aaPredicted RBP21.01■□□□□ 0.95
RETREG3-210ENST00000590541 COL9A1P20849 921 aa21.01■□□□□ 0.95
RETREG3-210ENST00000590541 TMEM132BQ14DG7 1078 aa21.01■□□□□ 0.95
RETREG3-210ENST00000590541 RNF180Q86T96 592 aa21.01■□□□□ 0.95
RETREG3-210ENST00000590541 C1orf115Q9H7X2 142 aa21.01■□□□□ 0.95
RETREG3-210ENST00000590541 MCM9Q9NXL9 1143 aa21.01■□□□□ 0.95
RETREG3-210ENST00000590541 ROBO3Q96MS0 1386 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 MAGEB6P1A0A0J9YX57 407 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 FAAP100Q0VG06 881 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms