RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 FERMT3Q86UX7 667 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 WNK4Q96J92 1243 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 MCOLN1Q9GZU1 580 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
VPS25-205ENST00000590339 MYH8P13535 1937 aa10.96□□□□□ -0.66
VPS25-205ENST00000590339 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 SSC5DA1L4H1 1573 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 MANSC4A6NHS7 340 aaPredicted RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 CCDC69A6NI79 296 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 H3BQV1 296 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 FIBPO43427 364 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 RANBP6O60518 1105 aaKnown RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 PLCG2P16885 1265 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 GJA5P36382 358 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 UBE2HP62256 183 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 NFIAQ12857 509 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 FOXD4L6Q3SYB3 417 aaPredicted RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 RRP12Q5JTH9 1297 aaKnown RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 CAVIN1Q6NZI2 390 aaKnown RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 FOXD4L3Q6VB84 417 aaPredicted RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 TTC6Q86TZ1 520 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 MICU3Q86XE3 530 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 RAB11FIP4Q86YS3 637 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 ZNF654Q8IZM8 581 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 TMTC2Q8N394 836 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 ENAHQ8N8S7 591 aaPredicted RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 NOL10Q9BSC4 688 aaKnown RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 R3HDMLQ9H3Y0 253 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
VPS25-205ENST00000590339 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
VPS25-205ENST00000590339 FLT1P17948 1338 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 ERICH2A1L162 156 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 CPLX1O14810 134 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 SLC3A2P08195 630 aaKnown RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 IFNAR1P17181 557 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 RXRAP19793 462 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 USP5P45974 858 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 VGLL4Q14135 290 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 ZSCAN23Q3MJ62 389 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 CPLX2Q6PUV4 134 aaKnown RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 NFXL1Q6ZNB6 911 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 FAM83AQ86UY5 434 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 FBXO18Q8NFZ0 1043 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 FAM151AQ8WW52 585 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 ZKSCAN4Q969J2 545 aaPredicted RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 UBAC1Q9BSL1 405 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
VPS25-205ENST00000590339 CSADQ9Y600 493 aa10.94□□□□□ -0.66
VPS25-205ENST00000590339 PLIN4Q96Q06 1357 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 UNCXA6NJT0 531 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 DDAH1O94760 285 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 ZBTB48P10074 688 aaPredicted RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 NCLP19338 710 aaKnown RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 INHBEP58166 350 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 PDE4BQ07343 736 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 PPP2R5BQ15173 497 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 RTN1Q16799 776 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 L1TD1Q5T7N2 865 aaKnown RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 FKBP1CQ5VVH2 108 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 FAM173BQ6P4H8 233 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 ZSCAN29Q8IWY8 852 aaPredicted RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 TEX11Q8IYF3 940 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS25-205ENST00000590339 ZNF296Q8WUU4 475 aaPredicted RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 LEO1Q8WVC0 666 aaPredicted RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 C8orf76Q96K31 380 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 WRNIP1Q96S55 665 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 SCAND2PQ9GZW5 306 aaPredicted RBP10.93□□□□□ -0.66
VPS25-205ENST00000590339 MCM9Q9NXL9 1143 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 THSD7BQ9C0I4 1608 aa10.93□□□□□ -0.66
VPS25-205ENST00000590339 GOLGA6L3A6NEY3 463 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 GPR25O00155 361 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 IGF2BP3O00425 579 aaKnown RBP eCLIP10.92□□□□□ -0.66
VPS25-205ENST00000590339 PRDM1O75626 825 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 FOSBP53539 338 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 PICALMQ13492 652 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 DCAF15Q66K64 600 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 SYNE3Q6ZMZ3 975 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 IQCA1Q86XH1 822 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 GAS2L3Q86XJ1 694 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 TGFBRAP1Q8WUH2 860 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 ANKS1AQ92625 1134 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms