RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 ANKRD13AQ8IZ07 590 aa17.71■□□□□ 0.43
DDX39A-211ENST00000590239 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
DDX39A-211ENST00000590239 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
DDX39A-211ENST00000590239 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
DDX39A-211ENST00000590239 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 GOLGA8AA7E2F4 631 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 STK3Q13188 491 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 VGLL4Q14135 290 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
DDX39A-211ENST00000590239 NECAB1Q8N987 351 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 SMC1BQ8NDV3 1235 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 GMCL1P1Q8NEA9 526 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
DDX39A-211ENST00000590239 MYL10Q9BUA6 226 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 AS3MTQ9HBK9 375 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
DDX39A-211ENST00000590239 A0A1W2PRG0 241 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 CELF2O95319 508 aaKnown RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 KIF5BP33176 963 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 FMR1Q06787 632 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 SCRN1Q12765 414 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 GRM4Q14833 912 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 RTN1Q16799 776 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 CCDC83Q8IWF9 413 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 C2orf69Q8N8R5 385 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 RBM46Q8TBY0 533 aaKnown RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 ACER1Q8TDN7 264 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 LLPHQ9BRT6 129 aaKnown RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 KIAA1683Q9H0B3 1180 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
DDX39A-211ENST00000590239 GBA2Q9HCG7 927 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
DDX39A-211ENST00000590239 TOMM70O94826 608 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
DDX39A-211ENST00000590239 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 RXRAP19793 462 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 ST3GAL1Q11201 340 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 MOB2Q70IA6 237 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 DCAF4Q8WV16 495 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 NCOA5Q9HCD5 579 aaKnown RBP17.68■□□□□ 0.42
DDX39A-211ENST00000590239 GOPCQ9HD26 462 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-211ENST00000590239 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-211ENST00000590239 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-211ENST00000590239 MYH4Q9Y623 1939 aa17.68■□□□□ 0.42
DDX39A-211ENST00000590239 F5H6K3 240 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 UBE2Q2LH0YL09 131 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 PDHBP11177 359 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 ECE1P42892 770 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 GNAQP50148 359 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 KLRC3Q07444 240 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 ASPRV1Q53RT3 343 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 SLFN13Q68D06 897 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 CPLX2Q6PUV4 134 aaKnown RBP17.67■□□□□ 0.42
DDX39A-211ENST00000590239 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 ZNF280CQ8ND82 737 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 GMCL1Q96IK5 515 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 FEZ1Q99689 392 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 OTOFQ9HC10 1997 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 PASKQ96RG2 1323 aa17.67■□□□□ 0.42
DDX39A-211ENST00000590239 PALM3A6NDB9 673 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-211ENST00000590239 SPDYE5A6NIY4 337 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 USP17L10C9JJH3 530 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 CPLX1O14810 134 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 CDKL5O76039 1030 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
DDX39A-211ENST00000590239 CDC27P30260 824 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 ADD1P35611 737 aaKnown RBP17.66■□□□□ 0.42
DDX39A-211ENST00000590239 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 CST9Q5W186 159 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-211ENST00000590239 ERO1BQ86YB8 467 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 DNAJC5GQ8N7S2 189 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 LZTS2Q9BRK4 669 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 VCPKMTQ9H867 229 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 AFG3L2Q9Y4W6 797 aa17.66■□□□□ 0.42
DDX39A-211ENST00000590239 TRPM7Q96QT4 1865 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 C19orf81C9J6K1 198 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 NDUFB10O96000 172 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 USP14P54578 494 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 PPATQ06203 517 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 ZNF543Q08ER8 600 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 FSTL1Q12841 308 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 SPP2Q13103 211 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 GPATCH4Q5T3I0 446 aaKnown RBP17.65■□□□□ 0.42
DDX39A-211ENST00000590239 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 LPAR1Q92633 364 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 CLMNQ96JQ2 1002 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 ELP3Q9H9T3 547 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 MAD2L2Q9UI95 211 aa17.65■□□□□ 0.42
DDX39A-211ENST00000590239 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 IFNAR1P17181 557 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 SLC1A4P43007 532 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 BACE1P56817 501 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms